Fruit firmness - Revision history

Stdalton at 03:36, 4 April 2013

2013-04-04T03:36:53Z

Stdalton at 19:08, 2 April 2013

2013-04-02T19:08:32Z

Stdalton at 19:07, 2 April 2013

2013-04-02T19:07:45Z

Stdalton at 19:31, 28 February 2013

2013-02-28T19:31:32Z

Stdalton at 19:30, 28 February 2013

2013-02-28T19:30:51Z

Stdalton at 18:50, 28 February 2013

2013-02-28T18:50:17Z

Stdalton at 13:50, 26 February 2013

2013-02-26T13:50:37Z

Stdalton at 19:24, 21 February 2013

2013-02-21T19:24:52Z

Stdalton at 19:17, 21 February 2013

2013-02-21T19:17:11Z

Stdalton at 19:04, 21 February 2013

2013-02-21T19:04:59Z

← Older revision		Revision as of 03:36, 4 April 2013
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	-List of pectate lyase proteins from Arabidopsis [[http://www.ncbi.nlm.nih.gov/protein/?term=%284.2.2.2%29+AND+%22Arabidopsis+thaliana%22[porgn%3A__txid3702]]		-List of pectate lyase proteins from Arabidopsis [[http://www.ncbi.nlm.nih.gov/protein/?term=%284.2.2.2%29+AND+%22Arabidopsis+thaliana%22[porgn%3A__txid3702]]
		+
		+	-List of expansin proteins from Arabidopsis [[http://www.personal.psu.edu/fsl/ExpCentral/arabidopsis.htm#AtEXP1]]

← Older revision		Revision as of 19:08, 2 April 2013
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	-Questions: Are there any other important proteins involved in the break down of the cell wall and/or middle lamella? In what pathway are these proteins involved? What are some transcription factors or triggers that activate these proteins?		-Questions: Are there any other important proteins involved in the break down of the cell wall and/or middle lamella? In what pathway are these proteins involved? What are some transcription factors or triggers that activate these proteins?

−	-List of pectate lyase proteins from Arabidopsis [[http://www.ncbi.nlm.nih.gov/protein]]	+	-List of pectate lyase proteins from Arabidopsis [[http://www.ncbi.nlm.nih.gov/protein/?term=%284.2.2.2%29+AND+%22Arabidopsis+thaliana%22[porgn%3A__txid3702]]

← Older revision		Revision as of 19:07, 2 April 2013
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	-Questions: Are there any other important proteins involved in the break down of the cell wall and/or middle lamella? In what pathway are these proteins involved? What are some transcription factors or triggers that activate these proteins?		-Questions: Are there any other important proteins involved in the break down of the cell wall and/or middle lamella? In what pathway are these proteins involved? What are some transcription factors or triggers that activate these proteins?
		+
		+	-List of pectate lyase proteins from Arabidopsis [[http://www.ncbi.nlm.nih.gov/protein]]

@@ Line 33: / Line 33: @@
 -'''pectate lyase''' (EC 4.2.3.2) http://www.ncbi.nlm.nih.gov/protein/AEE74778.1 and http://www.ncbi.nlm.nih.gov/gene/838004 (Arabidopsis)
--'''pectin lyase''' (EC 1.4.2.10) http://www.ncbi.nlm.nih.gov/gene/816922
+-'''pectin lyase''' (EC 1.4.2.10) http://www.ncbi.nlm.nih.gov/gene/816922 (Arabidopsis)
 [http://ehis.ebscohost.com/ehost/detail?vid=5&sid=3345496d-34ac-4d0f-a85e-95a1fe714849%40sessionmgr112&hid=2&bdata=JnNpdGU9ZWhvc3QtbGl2ZQ%3d%3d#db=a9h&AN=83523187]

@@ Line 18: / Line 18: @@
 -Expansin protein family website: http://genomebiology.com/2005/6/12/242
--Expansin protein from NCBI: http://www.ncbi.nlm.nih.gov/protein/AAC63088.1
+-Expansin protein from NCBI: http://www.ncbi.nlm.nih.gov/protein/AAC63088.1 and http://www.ncbi.nlm.nih.gov/gene/843288
 -It is believed that the alpha-expansin gene ''Le-ESP1'' plays a role in fruit softening: its over expression leads to softer fruit texture while its under expression leads to firmer fruits. [[File:expansinreview.pdf]]
@@ Line 27: / Line 27: @@
 -Pectins are broken down by '''pectinases'''. A list of different pectinases:
--'''pectin esterase''' (EC 3.1.1.11) http://www.ncbi.nlm.nih.gov/protein/82097 (Tomato)
+-'''pectin esterase''' (EC 3.1.1.11) http://www.ncbi.nlm.nih.gov/protein/82097 and http://www.ncbi.nlm.nih.gov/gene/820651 (Tomato)
--'''polygalacturonase''' (EC 3.2.1.15) http://www.ncbi.nlm.nih.gov/protein/AAA34177.1 (Tomato)
+-'''polygalacturonase''' (EC 3.2.1.15) http://www.ncbi.nlm.nih.gov/protein/AAA34177.1 and http://www.ncbi.nlm.nih.gov/gene/839391 (Tomato)
--'''pectate lyase''' (EC 4.2.3.2) http://www.ncbi.nlm.nih.gov/protein/AEE74778.1 (Arabidopsis)
+-'''pectate lyase''' (EC 4.2.3.2) http://www.ncbi.nlm.nih.gov/protein/AEE74778.1 and http://www.ncbi.nlm.nih.gov/gene/838004 (Arabidopsis)
--'''pectin lyase''' (EC 1.4.2.10)
+-'''pectin lyase''' (EC 1.4.2.10) http://www.ncbi.nlm.nih.gov/gene/816922
 [http://ehis.ebscohost.com/ehost/detail?vid=5&sid=3345496d-34ac-4d0f-a85e-95a1fe714849%40sessionmgr112&hid=2&bdata=JnNpdGU9ZWhvc3QtbGl2ZQ%3d%3d#db=a9h&AN=83523187]

← Older revision		Revision as of 18:50, 28 February 2013
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	-Status Report: [[File:Statusreport.pptx]]		-Status Report: [[File:Statusreport.pptx]]
		+
		+	-Questions: Are there any other important proteins involved in the break down of the cell wall and/or middle lamella? In what pathway are these proteins involved? What are some transcription factors or triggers that activate these proteins?

← Older revision		Revision as of 13:50, 26 February 2013
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	-Carbohydrate-Active Enzyme database: http://www.cazy.org/		-Carbohydrate-Active Enzyme database: http://www.cazy.org/
		+
		+	-Status Report: [[File:Statusreport.pptx]]

@@ Line 29: / Line 29: @@
 -'''polygalacturonase''' (EC 3.2.1.15)
--'''pectate lyase''' (EC 4.2.3.2) www.ncbi.nlm.nih.gov/protein/AEE74778.1
+-'''pectate lyase''' (EC 4.2.3.2) http://www.ncbi.nlm.nih.gov/protein/AEE74778.1
 -'''pectin lyase''' (EC 1.4.2.10).