Difference between revisions of "JP Feb 16 16"

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Line 5: Line 5:
 
Go to Terminal.
 
Go to Terminal.
 
Go into your destination file.
 
Go into your destination file.
cp -r ../campbell/fastQCintestine/trim_#i.fastq #destination_folder_name
+
cp -r ../campbell/fastQCintestine/trim_#i.fastq #destination_file_name
 +
 
 +
 
  
 
Ran Blast2Go using NCBI database and the following parameters (default):
 
Ran Blast2Go using NCBI database and the following parameters (default):

Revision as of 19:51, 16 February 2016

Julia Preziosi

Wrote a Media:Renamer.txt python document to rename the raw fastq files.

Go to Terminal. Go into your destination file. cp -r ../campbell/fastQCintestine/trim_#i.fastq #destination_file_name


Ran Blast2Go using NCBI database and the following parameters (default): Default1.png

Default2.png


Blast2GO on the first 20 genes from small intestine trimmed 1:

Blast2go20.png