Difference between revisions of "Alternative Start Codons"

Latest revision as of 16:00, 4 December 2008

Alternative Start Codons
Start Codon	JGI Predictions	RAST Predictions	Manatee Predictions
ATG	2604	1723	2562
Other	443	1128	646
Total	3047	2851	3208
Percentage Not ATG	14.3%	39.0%	19.9%

Note: All of the alternatives start codons were TTG or GTG. None were CTG.

@@ Line 7: / Line 7: @@
 |-
 ! Other
-| 493 || 1175 || 692
+| 443 || 1128 || 646
 |-
 ! Total
-| 3097 || 2898 || 3254
+| 3047 || 2851 || 3208
 |-
 !Percentage Not ATG
-| || 40.5% || 21.3%
+| 14.3% || 39.0% || 19.9%
 |}
+Note: All of the alternatives start codons were TTG or GTG. None were CTG.
-Percent Abnormal Starts:
-ATG's = 1314
-Other = 236
-ATG's = 1290
-Other = 257
-JGI: 0.159186309331611
-ATG's = 864
-Other = 591
-ATG's = 859
-Other = 584
-rast: 0.405452035886818
-ATG's = 1288
-Other = 334
-ATG's = 1274
-Other = 358
-manatee: 0.212661339889367