Difference between revisions of "Cas-Protein aa sequences"
| Line 2: | Line 2: | ||
CRISPR-associated protein Cas2 at complement(1004454..1004717) | CRISPR-associated protein Cas2 at complement(1004454..1004717) | ||
| − | + | MVYVVVVYDMEADRTHKMLKFLRRYLTHVQNSVLEGDVTEGDLEKIRSGVDDLLKPGESTIIYQISSEKLVDRSVFGDDPA<br>ADDQFL | |
> CRISPR-associated protein Cas1 at complement(1004721..1005719) | > CRISPR-associated protein Cas1 at complement(1004721..1005719) | ||
| − | + | MIMNDNYHVFSDGRIERHDDTVRVITDDGEKKYLPVENAEAIFLHGQIEYNTRFVSFLNQEGVAVHVFGWHDHYAGSIMP<br>KRGQTSGQTLVDQVRAYDDPAHRLELAQAFVDGSIHNMRANVTYYDGRGHDFEDVLAELTEARSSLDRMETIDET<br>MGVEARARKAYYSTFDEILPDEFVFGGRQYDPPNNEVNSLISFGNSLVYANVVSAIRATALDPTVSFLHEPGERRYSLA<br>LDIADLFKPLLADRVIFRLVNRGQLTSDDFEAEMNACLLNEHGRKTYSKAYEETLDETIEHPDLGKKVSYQYLLRVEV<br>YKLKKHLLTGEEYVPFQRWW | |
> CRISPR-associated RecB family exonuclease at CAYHDFCWSC" | > CRISPR-associated RecB family exonuclease at CAYHDFCWSC" | ||
Revision as of 17:07, 10 November 2009
Halomicrobium mukohataei:
CRISPR-associated protein Cas2 at complement(1004454..1004717)
MVYVVVVYDMEADRTHKMLKFLRRYLTHVQNSVLEGDVTEGDLEKIRSGVDDLLKPGESTIIYQISSEKLVDRSVFGDDPA
ADDQFL
> CRISPR-associated protein Cas1 at complement(1004721..1005719)
MIMNDNYHVFSDGRIERHDDTVRVITDDGEKKYLPVENAEAIFLHGQIEYNTRFVSFLNQEGVAVHVFGWHDHYAGSIMP
KRGQTSGQTLVDQVRAYDDPAHRLELAQAFVDGSIHNMRANVTYYDGRGHDFEDVLAELTEARSSLDRMETIDET
MGVEARARKAYYSTFDEILPDEFVFGGRQYDPPNNEVNSLISFGNSLVYANVVSAIRATALDPTVSFLHEPGERRYSLA
LDIADLFKPLLADRVIFRLVNRGQLTSDDFEAEMNACLLNEHGRKTYSKAYEETLDETIEHPDLGKKVSYQYLLRVEV
YKLKKHLLTGEEYVPFQRWW
> CRISPR-associated RecB family exonuclease at CAYHDFCWSC" MTDSSGDPVDRFLAAARDESAELPFRLTGVMFQYYVVCERELWFLSRDVEIDRDTPAIVRGSDVDDSAYADKRRDVRVDGIIAIDVLDSGEILEVKPSSSMTEPARLQLLFYLWYLDRVTGVEKTGVLAHPAEKRRETVELTPETSAEVESAIEGIRAVV
> CRISPR-associated helicase Cas3 at complement(1006273..1008843) MGTEPISHPATDGDEATRLLDHLDDVAGRAESVVSADATTIGGDPLPEMTAVVARCHDFGKATTWFQAYVVGERDASDRTNHSLLGAYLGYYVLDRLGYDSEDCLAALVALAKHHGQLPDVEEYVDGVSRFENTSEASNERQRILIEQVGNVDDHRRQFAQSFVADATDGNGSWEEFAQSIEDESLFDTVHEHVSLFGFGSDRSAPSEEFYGLLLQLWSGLVFADKTVAAGIENGDLDGSEPDARLLSEYIADLGGDTDEDGQAAALDTLRGEARDDVLGGVERFRDSEVSIATLTLPTGMGKTLTGLSAALALRDEGERVVYALPFTSVIDQVADELADVFDTDARDDLLTIHHHLAETVTKLGDPDEDPDEYARLAEMVAESWRSGMTLTTFVQLFESLVGPSNTQSMKLPALYDSVIVLDEPQALPMQWWKLVRRIATILTEEYDATIVAMTATQPRATDEETASQALFDDAFELVDDVDRYFGHFERVEYDVHDSVLAFDDTDAIVDYETAGRTILDETGRSESTLAICNTIDSATALTDAIEEREAVVDVGRCLELELDDGADVDALVERVESTLSSNERALVHLSTRLRPRDRLALVEATKRLTERDVPVLAVSTQLIEAGVDISFDRVYRDIAPIDSVVQAAGRCNRSFESDLGTVTVWWLAPPAGTTTTPAQAVYDSEGVSTISLTARTLDAIGADDGTVAEQTMTRDAVEHYYGLVADRNPGDPEYVKWVDEANADALGGLSLIGQRESVDVVVCRTDGDRELADAMVAALDEFDYDAFGDYREAAKDITVSLPIYSRDSTEAETVRNLEPLGDADLRVLRRARGTSYFDETKGLAVDEPCVDDRFL
> CRISPR-associated protein, TM1800 family at complement(1008843..1009520) MKQTYRVIPRTTVAGLIAAMLGIERDGYYDLFAPGESLVAIEPTSELRTMKLPMNTLSTADEHMASLNPRGKLSIKLPDPSKPRQQHNYEVLVEPAYRIDVWLADDERYDRLRSLLESGESYYVPSLGLSEHLATIDYHGEFPVEHGPDGETVAIDSTVPEAVDSIVPDPETRYQIEQTPAFMERDDGGRTTSAFVSYAYNPDGGSLRVADVSTYSVDDRAVVFT
> CRISPR-associated protein, TM1801 family at complement(1009635..1010690) MSEHYPTVSNRSEIVFAYDAVDANPNGNPLSGANRPRIDPHTDQAIVTDVRLKRYLRDQLQDDGHGVYIRNVKEDDGDQATREDLLEDRLKDIDLDDVDEADIENAVFGQFLENSADVRYFGATMSIDMDDEKVDHLPDHFTGPVQFSPGKSLHRVMENEEYNSLTSVIATGDDKAQGGFDLDDHRIQYAFIGFHGLVDEHGAEGTLLTDGDVRRLDTLCWRALKNQTISRSKVGQEPRLYLRVEYADESFHLGGLDQDIDLDSSESAPVEEIRNVRDICVDVSALLERLDAASDRIDTVHVVASDVLELSVDGETGGPEFLYDALESRVGSESVREIDVYEDAKATMPEE
Haloarcula californiae:
> CRISPR-associated helicase Cas3 at complement(1844..4447) MTFEQYISHPAKTDDGEPTLLIGEGGQFDQDGHLQTVANRMVEACRGQTLADGTPAEPVAEVIGLTHDFAKLTHWAQKHLRCQPFQHSDEYRYHAFPGALVTLYCLLNRRDGTGPLKDDHAAEVATLVVAGHHDIQSPPEPSKLAKNYGRDTLEVQETYKRITEQFEDIGDRVPERADQIIHKATDGEGSWEDFREWHADRTAPIDGPHHHLIYFAQIGDRDTRDGYYSDVVRLWTALKFADQTDASGLKNEDIGGTLLDRSELTRHIEDLDKGENVLAELNDLRNKARQEVTENVETLVKSNDVGLITLPTGFGKTYAGISAGLRAANINDSRLVYALPYTSILDQTASEIQSVFGVSPYSRAFTLHHHLSNTYTGLGDHYTDADIGRSPGALHAESWLSGVTLTTTVQLFESLAAPTARQATRVPALHEAVVVIDEPQAIPEDWWQIIPELVELLVDSYNATVILMTATQPGLVKYGSNTLNTRELTDATDKYTDFLADHPRVRYRLHDTVRTDVGDEYATLDYATAGSRVSGAAEGGRDVLAVCNTRASAEELYRSVTATVNTKEKVPVELGHLLHDYVEETGELPSPVELRRFAIDAVAERDVATLYAFLSGDVRPDDRKLIIDTLYDDEIGDEDEPEPLLDSDWSVILVSTSVVEAGVDVSFDTVFRDYAPIPNIVQSGGRCNRSFDGETGDVVVWRLAEPENGSAIPSLVIHGADGGDQLPLLLATGNVLRRHAARDGTIDESTMVSDTVSEFYESLFEGPLNPGNERLADAISSASMSELEGEHMIDEIEDYEDVVACLTDEERDDLLSSDPEAVSIRGHPGAQVSTDLEAWTKKVTIGNSQYLLVDALSGSYHPVFGVR
> CRISPR-associated protein, TM1800 family at complement(4458..5279) MTQQDLTDYASEGGDSSSSRYIPDTCIGFDVTADFAHFRKVGNNSAKPSYRIPPRTTVAGLLAGILGMPRDSYYDLFSPARSAIAIVPKGLPHTYTMGITTVNTKADDAIQYLPQEKHYTKSAEMLTPESYVKYDRQRDTYEMLVDPEYRVYVALSDQNSYNELRERLETSRYHYSPALGLSECIADIRNVEIHTVGPGIEDAVDSAAYDDSEVVPKPGVTIKRERAPLYMESTDGGRRTTEFGNITYAAGDDRLPVDESRTHTVGEHQVAFY
> CRISPR-associated protein, TM1801 family at complement(5304..6332) MTDTNDATIQNRSEIAFVIDAKDTNPNGDPLTADNEPRIDPVTGQCVVTDVRLKRYLRDQLVEDDHVVLIANPNDEVLTRKEMYDAVESEMGVSTDEAEPEELLEAFVKTAADVRYFGATISLDTDLAEDLPNQFEGPVQFNHGRSYHEVARNTESKQLATVIANEDDDGGKKDQGTFATDNRISYGVIGFGGRINDNAAKDTHLTEDDVERLDTLCWRALKNQTVTRSKAGQQPRLYIRVEYKQDGFEIGRLNDRIGVDSDLPEDEIRGTDDFNLDVSELVTTLADNDARIDTVHITADSAVTFALPDGETGDREALYTVLNDILGAEAVDAYDVYERYVN
