Difference between revisions of "Ribozyme Switch"
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* Self-cleavage ribozymes that cleave themselves in the presence of a target molecule | * Self-cleavage ribozymes that cleave themselves in the presence of a target molecule | ||
** This paper focuses on self-cleaving ribozymes with an aptamer sequence and a hammerhead ribozyme sequence | ** This paper focuses on self-cleaving ribozymes with an aptamer sequence and a hammerhead ribozyme sequence | ||
− | *** [[Helix- | + | *** [[Helix-Slipping]] based switch |
− | *** [[Strand- | + | *** [[Strand-Displacement]] based switch |
See also [[Riboswitches]] for additional information | See also [[Riboswitches]] for additional information | ||
== Experimental Design == | == Experimental Design == |
Revision as of 11:28, 20 November 2007
A ribozyme switch is a part of an mRNA that can directly bind to a small target molecule and whose binding affects the gene's ability. There are two aspects of a riboswitch, the aptamer and the expression platform. The aptamer portion binds to a target molecules and changes shape, affecting the expression platform, which is how gene expression is regulated. Some types of riboswitch mechanisms include:
- Formation of transcription termination hairpins
- Blockage of translation by folding to isolate ribosome-binding sites
- Effect of folding on splicing of mRNA
- Self-cleavage ribozymes that cleave themselves in the presence of a target molecule
- This paper focuses on self-cleaving ribozymes with an aptamer sequence and a hammerhead ribozyme sequence
- Helix-Slipping based switch
- Strand-Displacement based switch
- This paper focuses on self-cleaving ribozymes with an aptamer sequence and a hammerhead ribozyme sequence
See also Riboswitches for additional information
Contents
Experimental Design
http://www.pnas.org/content/vol104/issue36/images/large/zpq0340773700001.jpeg
Strand-Displacement
Helix-Slipping
http://www.pnas.org/content/vol104/issue36/images/large/zpq0340773700003.jpeg
Results
Link to Main Page
Applications of Ribozymes in Synthetic Systems - Danielle Jordan