Difference between revisions of "TRNA Genes Check List 2009"
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Megablast results in the nr/nt database showed a match with the following statistics: | Megablast results in the nr/nt database showed a match with the following statistics: | ||
[http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=Retrieve&db=nucleotide&dopt=GenBank&RID=9RYTV7DV01N&log%24=nucltop&blast_rank=4&list_uids=43459 Halobacterium cutirubrum transfer RNA-Val (GAC)] | [http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=Retrieve&db=nucleotide&dopt=GenBank&RID=9RYTV7DV01N&log%24=nucltop&blast_rank=4&list_uids=43459 Halobacterium cutirubrum transfer RNA-Val (GAC)] | ||
| − | + | S = 99.0 bits (53) | |
| − | + | E-value = 2e-18 | |
| − | + | Query Coverage: 100% | |
| − | + | Identities = 69/76 (90%) | |
| − | + | Gaps = 3/76 (3%) | |
| − | + | Strand=Plus/Plus | |
'''tRNA 644031821: tRNA-Gly''' | '''tRNA 644031821: tRNA-Gly''' | ||
Revision as of 17:01, 31 August 2009
tRNA 644031717: tRNA-Val
Megablast results in the nr/nt database showed a match with the following statistics:
Halobacterium cutirubrum transfer RNA-Val (GAC)
S = 99.0 bits (53)
E-value = 2e-18
Query Coverage: 100%
Identities = 69/76 (90%)
Gaps = 3/76 (3%)
Strand=Plus/Plus
tRNA 644031821: tRNA-Gly
Blastn results in the nr/nt database showed the following matches: Halobacterium volcanii Gly-tRNA-1A S = 69.8 bits (76) E-value = 1e-09 Query Coverage: 100% Identities = 58/71 (81%) Gaps = 0/71 (0%) Strand=Plus/Plus Halobacterium cutirubrum transfer RNA-Gly (GCC) S = 69.8 bits (76) E-value = 1e-09 Query Coverage: 100% Identities = 58/71 (81%) Gaps = 0/71 (0%) Strand=Plus/Plus
tRNA 644031874: tRNA-Val
Megablast results using the nr/nt database gave the following match: Halobacterium volcanii Val-tRNA-1 S = 115 bits (62) E-value = 2e-23 Query Coverage: 100% Identities = 71/75 (94%) Gaps = 1/75 (1%) Strand=Plus/Plus
