Difference between revisions of "TRNA Genes Check List 2009"

Revision as of 17:02, 31 August 2009

tRNA 644031717: tRNA-Val

  Megablast results in the nr/nt database showed a match with the following statistics:
    Halobacterium cutirubrum transfer RNA-Val (GAC)    
     S = 99.0 bits (53)
     E-value = 2e-18
     Query Coverage: 100%
     Identities = 69/76 (90%)
     Gaps = 3/76 (3%)
     Strand=Plus/Plus

tRNA 644031821: tRNA-Gly

 Blastn results in the nr/nt database showed the following matches:
   Halobacterium volcanii Gly-tRNA-1A
    S = 69.8 bits (76) 
    E-value = 1e-09
    Query Coverage: 100%
    Identities = 58/71 (81%)
    Gaps = 0/71 (0%)
    Strand=Plus/Plus
    
   Halobacterium cutirubrum transfer RNA-Gly (GCC)   
    S = 69.8 bits (76)
    E-value = 1e-09
    Query Coverage: 100%
    Identities = 58/71 (81%)
    Gaps = 0/71 (0%)
    Strand=Plus/Plus

tRNA 644031874: tRNA-Val

 Megablast results using the nr/nt database gave the following match:
  Halobacterium volcanii Val-tRNA-1
   S =  115 bits (62) 
   E-value = 2e-23
   Query Coverage: 100%
   Identities = 71/75 (94%)
   Gaps = 1/75 (1%)
   Strand=Plus/Plus

tRNA 644031888: tRNA-Met

 Megablast results using the nr/nt database showed the following matches: