Difference between revisions of "Cation pumps"

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[[Image:Picture 15.png]]
 
[[Image:Picture 15.png]]
  
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032384 archaeal/vacuolar-type H+-ATPase subunit I ( EC:3.6.3.14 ) 644032384]
+
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032384 archaeal/vacuolar-type H+-ATPase subunit I ( EC:3.6.3.14 ) 644032384]<br>
 +
A BLAST using megablast produced the following results:<br>
 +
[[Image:Picture 16.png]]<br>
  
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032472 K+ transport system, NAD-binding component 644032472]
+
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032472 K+ transport system, NAD-binding component 644032472]<br>
  
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032488 NAD+ synthetase ( EC:6.3.5.1 ) 644032488]
+
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032488 NAD+ synthetase ( EC:6.3.5.1 ) 644032488]<br>
  
 
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032494 NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5) (IMGterm) 644032494]
 
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032494 NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5) (IMGterm) 644032494]

Revision as of 16:41, 17 September 2009

The following is a list of the cation pumps and cation-influenced structures encoded in our organism's genome:

Na+/proline symporter 644032116
A BLAST (megablast) of the gene encoding this ion pump produced the following results:
Picture 5.png

Kef-type K+ ransport system, predicted NAD-binding component 644032129
A BLAST using megablast produced no results other than our own species.
A BLAST (blastn) of the gene encoding this ion pump produced the following results:
Picture 6.png

Ca2+/Na+ antiporter 644032240
A BLAST using megablast produced no results other than our own species.
A BLAST using blastn produced the following results:
Picture 7.png

Mn2+/Fe2_ transporter, NRAMP family 644032307
A BLAST using megablast produced the following results:
Picture 8.png

H(+)-transporting ATP synthase, vacuolar type, subunit D ( EC:3.6.3.14 ) 644032373
A BLAST using megablast produced the following results:
Picture 10.png
A BLAST using blastn produced the following results:
Picture 11.png

archaeal/vacuolar-type H+-ATPase subunit B ( EC:3.6.3.14 ) 644032378
A BLAST using megablast produced the following results:
Picture 12.png
A BLAST using blastn produced the following results:
Picture 13.png

archaeal/vacuolar-type H+-ATPase subunit F ( EC:3.6.3.14 ) 644032380
A BLAST using megablast produced no results other than our own species.
A BLAST using blastn produced the following results:
Picture 14.png

archaeal/vacuolar-type H+-ATPase subunit E ( EC:3.6.3.14 ) 644032382
A BLAST using megablast produced no results other than our own species.
A BLAST using blastn produced the following results:
Picture 15.png

archaeal/vacuolar-type H+-ATPase subunit I ( EC:3.6.3.14 ) 644032384
A BLAST using megablast produced the following results:
Picture 16.png

K+ transport system, NAD-binding component 644032472

NAD+ synthetase ( EC:6.3.5.1 ) 644032488

NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5) (IMGterm) 644032494

ABC-type Mn2+/Zn2+ transport system, permease component 644032648

K+ transport system, NAD-binding component 644032689

NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit ( EC:1.6.5.3 ) 644032725

regulatory ligand binding protein similar to C-terminal domain of K+ channels 644032853

K+ transport system, membrane component 644032854

NhaP-type Na+(K+)/H+ antiporter 644032916

AAA+ family ATPase 644032920

ABC-type Fe3+ transport system, periplasmic component 644033032

ABC-type Mn2+/Zn2+ transport system, permease component 644033110

AAA+ family ATPase 644033168