Difference between revisions of "Cation pumps"
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[[Image:Picture 24.png]] | [[Image:Picture 24.png]] | ||
| − | [http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032648 ABC-type Mn2+/Zn2+ transport system, permease component 644032648] | + | [http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032648 ABC-type Mn2+/Zn2+ transport system, permease component 644032648]<br> |
| + | A BLAST using megablast produced no results other than our own species.<br> | ||
| + | A BLAST using blast n produced the following results:<br> | ||
| + | [Image:Picture 27.png]<br> | ||
| − | [http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032689 K+ transport system, NAD-binding component 644032689] | + | [http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032689 K+ transport system, NAD-binding component 644032689]<br> |
| + | A BLAST using megablast produced the following results:<br> | ||
| + | [[Image:Picture 28.png]]<br> | ||
| + | [[Image:Picture 29.png]]<br> | ||
| + | Trk active potassium channel<br> | ||
| + | Potassium channel protein<br> | ||
| + | A BLAST using blastn produced the following results:<br> | ||
| + | [[Image:Picture 30.png]]<br> | ||
| − | [http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032725 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit ( EC:1.6.5.3 ) 644032725] | + | [http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032725 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit ( EC:1.6.5.3 ) 644032725]<br> |
| − | [http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032853predicted regulatory ligand binding protein similar to C-terminal domain of K+ channels 644032853] | + | |
| + | [http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032853predicted regulatory ligand binding protein similar to C-terminal domain of K+ channels 644032853]<br> | ||
| + | A BLAST using m | ||
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032854Kef-type K+ transport system, membrane component 644032854] | [http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032854Kef-type K+ transport system, membrane component 644032854] | ||
Revision as of 16:05, 24 September 2009
The following is a list of the cation pumps and cation-influenced structures encoded in our organism's genome:
Na+/proline symporter 644032116
A BLAST (megablast) of the gene encoding this ion pump produced the following results:
Kef-type K+ ransport system, predicted NAD-binding component 644032129
A BLAST using megablast produced no results other than our own species.
A BLAST (blastn) of the gene encoding this ion pump produced the following results:
Ca2+/Na+ antiporter 644032240
A BLAST using megablast produced no results other than our own species.
A BLAST using blastn produced the following results:
Mn2+/Fe2_ transporter, NRAMP family 644032307
A BLAST using megablast produced the following results:
H(+)-transporting ATP synthase, vacuolar type, subunit D ( EC:3.6.3.14 ) 644032373
A BLAST using megablast produced the following results:
A BLAST using blastn produced the following results:
archaeal/vacuolar-type H+-ATPase subunit B ( EC:3.6.3.14 ) 644032378
A BLAST using megablast produced the following results:
A BLAST using blastn produced the following results:
archaeal/vacuolar-type H+-ATPase subunit F ( EC:3.6.3.14 ) 644032380
A BLAST using megablast produced no results other than our own species.
A BLAST using blastn produced the following results:
archaeal/vacuolar-type H+-ATPase subunit E ( EC:3.6.3.14 ) 644032382
A BLAST using megablast produced no results other than our own species.
A BLAST using blastn produced the following results:
archaeal/vacuolar-type H+-ATPase subunit I ( EC:3.6.3.14 ) 644032384
A BLAST using megablast produced the following results:
A BLAST using blastn produced the following results:
K+ transport system, NAD-binding component 644032472
A BLAST using megablast produced no results other than our own species.
A BLAST using blast n produced the following results:
NAD+ synthetase ( EC:6.3.5.1 ) 644032488
A BLAST using megablast produced no results other than our own species.
A BLAST using blastn produced the following results:
NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5) (IMGterm) 644032494
A BLAST using megablast produced the following results:
A BLAST using blastn produced the following results:
ABC-type Mn2+/Zn2+ transport system, permease component 644032648
A BLAST using megablast produced no results other than our own species.
A BLAST using blast n produced the following results:
[Image:Picture 27.png]
K+ transport system, NAD-binding component 644032689
A BLAST using megablast produced the following results:
Trk active potassium channel
Potassium channel protein
A BLAST using blastn produced the following results:
regulatory ligand binding protein similar to C-terminal domain of K+ channels 644032853
A BLAST using m
K+ transport system, membrane component 644032854
NhaP-type Na+(K+)/H+ antiporter 644032916
ABC-type Fe3+ transport system, periplasmic component 644033032
ABC-type Mn2+/Zn2+ transport system, permease component 644033110
