Status Of Building Parts
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					Revision as of 19:16, 5 June 2008 by PaPenumetcha (talk | contribs)
MWSU + Davidson Status of Building Sender and Receiver
plux-lac hybrid promoter:
- I751502
- In the process of building another plux-lac hybrid promoter that is repressed by HSL and lacI
Responsible: Robert Cool, Erin Feeney and Pallavi Penumetcha 
Parts we have Mini-Preps and Digestions for
| Part | Description | Size of Insert (w/ BioBrick ends) | Verification using Gel Electrophoresis | 
|---|---|---|---|
| BBa_F2620 | Accepts 3OC6HSL as an input and outputs PoPS | 1102 bp | Appears to be reversed with J04430 | 
| BBa_J04430 | GFP generator switched on by IPTG | 1124 bp | Appears to be reversed with F2620 | 
| BBa_P0440 | Produces tetR | 881 bp | Verified | 
| BBa_E0240 | GFP generator | 917 bp | Verified | 
| BBa_I132623 | Lux receiver that produces luxR and outputs EYFP | 2085 bp | Much smaller on gel | 
| BBa_I0426 | Produces lasR and outputs ECFP followed by a lasR-PAI regulated promoter that outputs EYFP | 2839 bp | Verified | 
| BBa_C0061 | Produces luxI (w/ LVA tag) | 659 bp | Verified | 
| BBa_C0261 | Produces luxI (w/ RBS) | 702 bp | No successful Mini-Preps | 
| BBa_R0062 | luxR and HSL regulated promoter | 96 bp | Verified | 
| BBa_I0466 | RhlR protein generator | 983 bp | Verified | 
| BBa_I0407 | Produces lasI and outputs ECFP | 1674 bp | Verified | 
| BBa_R0079 | LasR and PAI regulated promoter | 198 bp | Verified | 
| BBa_R0063 | LuxR and HSL regulated promoter | 192 bp | Have not yet digested | 
| BBa_K09100 | Receiver for AHL and outputs GFP | 1987 bp | Verified | 
| BBa_J04450 | RFP coding device switched on by IPTG | 2110 bp | Much smaller on gel | 
-We will be sending all of these parts to be sequenced 
Gels used to verify parts 
Gel A 
These are the parts run on a 0.5% gel.
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| Lane | Part | 
|---|---|
| 1 | MW | 
| 2 | F0260 | 
| 3 | J04430 | 
| 4 | P0440 | 
| 5 | E0240 | 
| 6 | I13263 | 
| 7 | J0440 | 
| Lane | Part | 
|---|---|
| 1 | MW | 
| 2 | C0061 | 
| 3 | I0466 | 
| 4 | I0407 | 
| 5 | I0426 | 
| 6 | K09100 | 
Gel B 
These parts were run on a 2.5% gel. 
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| Lane | Part | 
|---|---|
| 1 | MW | 
| 2 | R0062 | 
| 3 | R0079 | 
| 9 | pTet-lac PCR product | 
| 10 | pTet-lac PCR product | 
Look at USTC 2007 for logic gates
T9002 - no colonies
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F2622 + E0240 (ligated/colonies coming up)
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S03632 (ligations needed)
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 But BBa_S03632 is not available, so we will need to build our own version using the 3 parts below:
Parts: R0011  + C0261 + B0015
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R0011 + F1610 (minis, frag needed/colonies coming up, minis thurs)
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F2620 + E0240 (minis growing/ frag available)
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