Time of bloom
Contents
Total Genes
AG AGL19 AGL24 AP1 AP2 AP3 ARP6 ART1 CAL CCA1 CLF CO CRY CRY2 CRY3 EBS EFS ELF3 ELF4 ELF7 ELF8 EMF1 EMF2 ESD4 FCA FD FES1 FIE FKF1 FLC FLD FLK FLM/MAF1/AGL27 FPA FRI FRL1 FRL2 FT FUL FVE FY GAI GI Hd1 LD LFR LFY LHP1 LHY LMI1 LUG MAF2/AGL31 MAF3 MAF4 MAF5 MIR172A MIR172B PAF1 PFT1 PHYA PHYB PHYC PHYE PI PIE1 PIF4 PNF PNY RGA SAP18 SEP3 SEU SMZ SNZ SOC1/AGL20 SPL3 SPL9 SPY STM SVP/AGL22 SYD TEM1 TEM2 TFL1 TFL2 TOC1 TOE1 TOE2 TOE3 TSF UFO VIN3 VIP VIP3 VIP4 VRN1 VRN2 ZTL
Overall Pathway
Pathway 1; Pathway 2; Pathway 3; Pathway 4; Pathway 5; Pathway 6; Pathway 7; Pathway 8; Pathway 9; Pathway 10; Pathway 11; Pathway 12; Pathway 13; Pathway 14; Pathway 15; Pathway 16; Pathway 17; Pathway 18; Pathway 19
Flower Meristem Identity
Primary Genes: Agamous, Apetala1, Apetala2, Cauliflower, Fruitfull, Leafy, Unusual Floral Organs Henderson and Dean, 2004 UC San Diego Mizukami and Ma, 1997
Other Genes: Apetala3, Pistillata
Purpose: These genes "control the identity that a meristem will adopt. These meristem identity genes are activated in response to developmental and environmental cues ... [and are essentially the] master regulators that control the entire floral initiation process." Pidkowich et al., 1999
Floral Pathway Integrators
Primary Genes: Flowering Locus T, Leafy, Supressor of Overexpression of Constans1 Henderson and Dean, 2004
Other Genes: FD (bZIP transcription factor), Twin Sister of FT Abe et al., 2005 Yamaguchi et al., 2005
Purpose: "The multiple pathways quantitatively regulate an overlapping set of common targets, the floral pathway integrators, whose activities convert the shoot apical meristem to a reproductive fate." Boss et al., 2004
Genes Involved
| Abbreviation | Name | DNA Sequence Available At: |
| AG | Agamous | NCBI |
| AGL19 | Agamous-Like 19 | NCBI |
| AGL24 | Agamous-Like 24 | NCBI |
| AP1 | Apetala 1 | NCBI |
| AP2 | Apetala 2 | NCBI |
| AP3 | Apetala 3 | NCBI |
| ARP6 | Actin-Related Protein 6 | NCBI |
| ART1 | Aerial Rosette 1 | Amino Acid Sequence UniProt |
| CAL | Cauliflower | NCBI |
| CCA1 | Circadian Clock Associated 1 | NCBI |
| CLF | Curly Leaf | NCBI |
| CO | Constans | NCBI |
| CRY1 | Cryptochrome 1 | NCBI |
| CRY2 | Cryptochrome 2 | NCBI |
| CRY3 | Cryptochrome 3 | NCBI |
| EBS | Early Bolting in Short Days | NCBI |
| EFS | Early Flowering in Short Days | NCBI |
| ELF3 | Early Flowering 3 | NCBI |
| ELF4 | Early Flowering 4 | NCBI |
| ELF7 | Early Flowering 7 | NCBI |
| ELF8 | Early Flowering 8 | NCBI |
| EMF1 | Embryonic Flower 1 | NCBI |
| EMF2 | Embryonic Flower 2 | NCBI |
| ESD4 | Early Under Short Days 4 | NCBI |
| FCA | Flowering Time Control Alpha | NCBI |
| FD | FD | NCBI |
| FES1 | Frigida-Essential 1 | NCBI |
| FIE | Fertilization-Independent Endosperm | NCBI |
| FKF1 | Flavin-Binding/Kelch Repeat | NCBI |
| FLC | Flowering Locus C | NCBI |
| FLD | Flowering Locus D | NCBI |
| FLK | Flowering Locus K | NCBI |
| FLM/MAF1/AGL27 | Flowering Locus M | NCBI |
| FPA | Flowing Time Control | NCBI |
| FRI | Frigida-Like | NCBI |
| FRL1 | Frigida-Like 1 | NCBI |
| FRL2 | Frigida-Like 2 | NCBI |
| FT | Flowering Locus T | NCBI |
| FUL/AGL8 | Fruitfull | NCBI |
| FVE | Nucleosome/Chromatin Assembly Factor Group C | NCBI |
| FY | Flowing Time Control | NCBI |
| GAI | Gibberellic Acid Insensitive | NCBI |
| GI | Gigantea | NCBI |
| Hd1 | Histone Deacetylase 1 | NCBI |
| LD | Luminidependens | NCBI |
| LFR | Leaf and Flower Related | NCBI |
| LFY | Leafy | NCBI |
| LHP1 | Like Heterochromatin Protein 1 | NCBI |
| LHY | Late Elongated Hypocotyl | NCBI |
| LMI1 | Late Meristem Identity 1 | NCBI |
| LUG | Leunig | NCBI |
| MAF2/AGL31 | MADS Affecting Flowering 2 | NCBI |
| MAF3 | MADS Affecting Flowering 3 | NCBI |
| MAF4 | MADS Affecting Flowering 4 | NCBI |
| MAF5 | MADS Affecting Flowering 5 | NCBI |
| MIR172A | MicroRNA 172 A | NCBI |
| MIR172B | MicroRNA 172 B | NCBI |
| PAF1 | Proteasome Subunit Alpha | NCBI |
| PFT1 | Phytochrome and Flowering Time 1 | NCBI |
| PHYA | Phytochrome A | NCBI |
| PHYB | Phytochrome B | NCBI |
| PHYC | Phytochrome C | NCBI |
| PHYE | Phytochrome E | NCBI |
| PI | Pistillata | NCBI |
| PIE1 | Photoperiod-Independent Early Flowering 1 | NCBI |
| PIF4 | Phytochrome Interacting Factor 4 | NCBI |
| PNF | Pound-Foolish | NCBI |
| PNY | Pennywise | NCBI |
| RGA | Repressor of GA | NCBI |
| SAP18 | SIN3 Associated Polypeptide P18 | NCBI |
| SEP3 | Sepallata | NCBI |
| SEU | Seuss | NCBI |
| SMZ | Schlafmutze | NCBI |
| SNZ | Schnarchzapfen | NCBI |
| SOC1/AGL20 | Supressor of Overexpression of Constans 1 | NCBI |
| SPL3 | Squamosa Promoter-Binding-Like Protein 3 | NCBI |
| SPL9 | Squamosa Promoter-Binding-Like Protein 9 | NCBI |
| SPY | Spindly | NCBI |
| STM | Shoot Meristemless | NCBI |
| SVP/AGL22 | Short Vegetative Phase | NCBI |
| SYD | Splayed | NCBI |
| TEM1 | Tempranillo 1 | NCBI |
| TEM2 | Tempranillo 2 | NCBI |
| TFL1 | Terminal Flower 1 | NCBI |
| TFL2 | Terminal Flower 2 | NCBI |
| TOC1 | Timing of CAB Expression | NCBI |
| TOE1 | Target of EAT 1 | NCBI |
| TOE2 | Target of EAT 2 | NCBI |
| TOE3 | Target of EAT 3 | NCBI |
| TSF | Twin Sister of FT | NCBI |
| UFO | Unusual Floral Organs | NCBI |
| VIN3 | Vernalization Insensitive 3 | NCBI |
| VIP | Vernalization Independence | NCBI |
| VIP3 | Vernalization Independence 3 | NCBI |
| VIP4 | Vernalization Independence 4 | NCBI |
| VRN1 | Vernalization 1 | NCBI |
| VRN2 | Vernalization 2 | NCBI |
| ZTL | Zeitlupe | NCBI |
