Difference between revisions of "Chitinase"
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The pathway above is labeled for a halophile, haloarcula marismortui (most of the other halophiles on KEGG did not have a reference pathway for Aminosugars Metabolism). As you can see, Chitinase (EC#:3.2.1.14) is not predicted for this halophile.<br> | The pathway above is labeled for a halophile, haloarcula marismortui (most of the other halophiles on KEGG did not have a reference pathway for Aminosugars Metabolism). As you can see, Chitinase (EC#:3.2.1.14) is not predicted for this halophile.<br> | ||
<br><br> | <br><br> | ||
| − | The only automated annotation database to predict a Chitinase was Manatee. Manatee predicted Chitinase A at 55855...57810.<br> | + | The only automated annotation database to predict a Chitinase was Manatee. Manatee predicted Chitinase A at 55855...57810. [http://www.tigr.org/tigr-scripts/prok_manatee/shared/ORF_infopage.cgi?db=nthu01&orf=ORF00052 Chitinase A: Manatee]<br> |
The top BlastP results: [[Image:blastpr.png]]<br><br> | The top BlastP results: [[Image:blastpr.png]]<br><br> | ||
As you can see, Chitinase A is not among the top hits. However, there is one hit for it further down the list:<br> | As you can see, Chitinase A is not among the top hits. However, there is one hit for it further down the list:<br> | ||
[[Image:blastpr2.png]] | [[Image:blastpr2.png]] | ||
Revision as of 16:03, 6 November 2008
KEGG Pathway containing Chitinase: Aminosugars Metabolism
The pathway above is labeled for a halophile, haloarcula marismortui (most of the other halophiles on KEGG did not have a reference pathway for Aminosugars Metabolism). As you can see, Chitinase (EC#:3.2.1.14) is not predicted for this halophile.
The only automated annotation database to predict a Chitinase was Manatee. Manatee predicted Chitinase A at 55855...57810. Chitinase A: Manatee
The top BlastP results: 
As you can see, Chitinase A is not among the top hits. However, there is one hit for it further down the list:
