Difference between revisions of "Missing tRNA-trp gene found"
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'''tRNA-trp-CCA:'''<br> | '''tRNA-trp-CCA:'''<br> | ||
| − | DNA Coordinates: | + | DNA Coordinates: 465601..465777 (-)<br> |
| + | <br> | ||
| + | GGGGTCGTGGCCAAGTCCGGCATGGCGACTGACTCCAGAGGCACCGCGCCCGGGACGACACTCCAG<br> | ||
| + | ACTGATATACTGAGCGACCGGCTGATCACCGGACGCCTTGATGACCCTCTGGAGTTCCGAGGCGCA<br> | ||
| + | ACCGGAGATATCAGTCGATCGGGAGTTCAAATCTCTCCGACCCCA<br> | ||
| + | <br> | ||
| + | Evidence:<br> | ||
| + | <br> | ||
| − | + | Similarity with ''Haloferax volcanii'' tRNA-trp<br> | |
| + | Score = 190 bits (96), Expect = 2e-49<br> | ||
| + | Identities = 155/172 (90%), Gaps = 2/172 (1%)<br> | ||
<br> | <br> | ||
| − | + | Similarity with ''Halobacterium salinarum R1'' tRNA-trp<br> | |
| − | Similarity with ''Haloarcula marismortui tRNA-trp | + | Score = 174 bits (88), Expect = 1e-44<br> |
| − | Score = 163 bits (82), Expect = 4e-41 | + | Identities = 154/172 (89%), Gaps = 3/172 (1%)<br> |
| − | + | <br> | |
| − | + | Similarity with ''Haloarcula marismortui'' tRNA-trp<br> | |
| + | Score = 163 bits (82), Expect = 4e-41<br> | ||
| + | Identities = 159/181 (87%), Gaps = 4/181 (2%)<br> | ||
| + | <br> | ||
| + | Similarity with ''Natronomonas pharaonis'' tRNA-trp<br> | ||
| + | Score = 163 bits (82), Expect = 4e-41<br> | ||
| + | Identities = 159/181 (87%), Gaps = 4/181 (2%)<br> | ||
Revision as of 15:15, 23 September 2008
tRNA-trp-CCA:
DNA Coordinates: 465601..465777 (-)
GGGGTCGTGGCCAAGTCCGGCATGGCGACTGACTCCAGAGGCACCGCGCCCGGGACGACACTCCAG
ACTGATATACTGAGCGACCGGCTGATCACCGGACGCCTTGATGACCCTCTGGAGTTCCGAGGCGCA
ACCGGAGATATCAGTCGATCGGGAGTTCAAATCTCTCCGACCCCA
Evidence:
Similarity with Haloferax volcanii tRNA-trp
Score = 190 bits (96), Expect = 2e-49
Identities = 155/172 (90%), Gaps = 2/172 (1%)
Similarity with Halobacterium salinarum R1 tRNA-trp
Score = 174 bits (88), Expect = 1e-44
Identities = 154/172 (89%), Gaps = 3/172 (1%)
Similarity with Haloarcula marismortui tRNA-trp
Score = 163 bits (82), Expect = 4e-41
Identities = 159/181 (87%), Gaps = 4/181 (2%)
Similarity with Natronomonas pharaonis tRNA-trp
Score = 163 bits (82), Expect = 4e-41
Identities = 159/181 (87%), Gaps = 4/181 (2%)
