User contributions
From GcatWiki
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- 12:27, 20 October 2022 (diff | hist) . . (-6) . . Synergy Machine Protocol for Bio113 (current)
- 13:12, 28 September 2022 (diff | hist) . . (+4) . . APe Sequence Analysis (current)
- 12:02, 15 September 2022 (diff | hist) . . (-1) . . PCR for Bio113 (→PCR Verification of Successful GGA) (current)
- 17:49, 2 September 2022 (diff | hist) . . (-67) . . Bacterial Transformation for Bio113 (→Transforming DNA after GGA Ligation) (current)
- 20:41, 9 August 2022 (diff | hist) . . (+422) . . N Freeze glycerol stocks of E. coli (Created page with "To preserve all stocks of each strain derived from a unique colony, we will freeze glycerol stock at -80 C. # Put 37.5 µL of warmed glycerol in a pre-labeled sterile 1.5 mL...") (current)
- 20:39, 9 August 2022 (diff | hist) . . (-7) . . Davidson Bio113 Protocols (current)
- 20:38, 9 August 2022 (diff | hist) . . (+49) . . Davidson Bio113 Protocols
- 16:05, 9 August 2022 (diff | hist) . . (+112) . . Synergy Machine Protocol for Bio113
- 19:53, 1 December 2020 (diff | hist) . . (+158) . . Sequence DNA for Bio113 (current)
- 19:53, 1 December 2020 (diff | hist) . . (+6) . . Sequence DNA for Bio113
- 19:52, 1 December 2020 (diff | hist) . . (+61) . . Sequence DNA for Bio113
- 14:02, 5 February 2020 (diff | hist) . . (+24) . . Golden Gate Assembly for Bio113 (current)
- 15:35, 3 January 2020 (diff | hist) . . (+20) . . Sequence DNA for Bio113
- 15:33, 3 January 2020 (diff | hist) . . (0) . . Nanodrop DNA for Bio113 (current)
- 15:32, 3 January 2020 (diff | hist) . . (-1) . . Nanodrop DNA for Bio113
- 15:29, 3 January 2020 (diff | hist) . . (+1) . . Nanodrop DNA for Bio113
- 21:24, 24 September 2019 (diff | hist) . . (+68) . . Davidson Protocols (current)
- 06:07, 3 March 2019 (diff | hist) . . (+2) . . Golden Gate Assembly protocol (current)
- 19:15, 13 January 2019 (diff | hist) . . (+328) . . Davidson Protocols
- 00:59, 7 November 2018 (diff | hist) . . (-220) . . Miniprep Plasmid DNA for Bio113 (current)
- 00:57, 7 November 2018 (diff | hist) . . (+14) . . Sequence DNA for Bio113
- 18:37, 6 November 2018 (diff | hist) . . (+66) . . Miniprep Plasmid DNA for Bio113
- 18:27, 6 November 2018 (diff | hist) . . (+87) . . Miniprep Plasmid DNA for Bio113
- 19:32, 23 October 2018 (diff | hist) . . (0) . . Bacterial Transformation for Bio113
- 19:21, 23 October 2018 (diff | hist) . . (+5) . . Bacterial Transformation for Bio113
- 13:29, 16 October 2018 (diff | hist) . . (+110) . . Davidson Protocols
- 13:28, 16 October 2018 (diff | hist) . . (-1) . . Davidson Protocols
- 20:49, 27 September 2018 (diff | hist) . . (+1) . . Davidson Protocols
- 20:49, 27 September 2018 (diff | hist) . . (+127) . . Davidson Protocols
- 19:47, 25 September 2018 (diff | hist) . . (-10) . . PCR for Bio113
- 22:43, 24 September 2018 (diff | hist) . . (+2) . . PCR for Bio113 (→PCR Verification of Successful GGA)
- 22:43, 24 September 2018 (diff | hist) . . (+11) . . PCR for Bio113
- 22:27, 17 September 2018 (diff | hist) . . (0) . . PCR for Bio113
- 21:06, 28 August 2018 (diff | hist) . . (+4) . . Davidson Protocols
- 21:06, 28 August 2018 (diff | hist) . . (+14) . . Davidson Protocols
- 20:34, 27 August 2018 (diff | hist) . . (+154) . . Davidson Protocols
- 13:08, 6 August 2018 (diff | hist) . . (-239) . . Sequence DNA for Bio113
- 13:06, 6 August 2018 (diff | hist) . . (+19) . . Bacterial Transformation for Bio113
- 20:30, 17 May 2018 (diff | hist) . . (+2) . . Golden Gate Assembly for Bio113
- 18:34, 16 March 2018 (diff | hist) . . (+4) . . Mouse Charcot-Marie-Tooth type 2D RNAseq Project (→C. elegans nhr-25 experiments) (current)
- 14:52, 15 March 2018 (diff | hist) . . (+138) . . Mouse Charcot-Marie-Tooth type 2D RNAseq Project (→C. elegans nhr-25 experiments)
- 11:57, 15 March 2018 (diff | hist) . . (+373) . . Mouse Charcot-Marie-Tooth type 2D RNAseq Project
- 15:47, 6 February 2018 (diff | hist) . . (+72) . . Malcolm Campbell (current)
- 15:30, 6 February 2018 (diff | hist) . . (-1) . . m What does TopHat do? (current)
- 15:22, 6 February 2018 (diff | hist) . . (+6) . . What does TopHat do?
- 15:22, 6 February 2018 (diff | hist) . . (+89) . . What does TopHat do?
- 15:19, 6 February 2018 (diff | hist) . . (+100) . . N How does it differ from HISAT2? (Created page with "New and improved version of TopHat. It aligns RNAseq reads to the genome and deals with intron gaps.") (current)
- 15:18, 6 February 2018 (diff | hist) . . (+61) . . What does TopHat do?
- 15:15, 6 February 2018 (diff | hist) . . (+385) . . N What does TopHat do? (Created page with "'''TopHat''' aligns RNA-seq reads to mammalian-sized genomes (in our case, to the mm10 mouse genome build). Because we are using paired-end datasets, forward and reverse, we n...")
- 15:10, 6 February 2018 (diff | hist) . . (+5) . . What does Timmomatic do?
- 15:10, 6 February 2018 (diff | hist) . . (+2) . . How is it connected to FastQC? (current)
- 15:09, 6 February 2018 (diff | hist) . . (+5) . . How is it connected to FastQC?
- 15:07, 6 February 2018 (diff | hist) . . (+11) . . How is it connected to FastQC?
- 15:03, 6 February 2018 (diff | hist) . . (+6) . . Malcolm Campbell
- 15:03, 6 February 2018 (diff | hist) . . (+53) . . Malcolm Campbell
- 15:02, 6 February 2018 (diff | hist) . . (+4) . . Malcolm Campbell
- 15:02, 6 February 2018 (diff | hist) . . (+500) . . Malcolm Campbell
- 15:01, 6 February 2018 (diff | hist) . . (+74) . . N Do we have the data we want to use? (Created page with "We have the data we were given. Therefore we have the data we want to use.") (current)
- 15:00, 6 February 2018 (diff | hist) . . (+267) . . N What is the source of our data? (Created page with "Although we had been told we would be working with P247KY, we were given C201R data instead. When I checked with Emily Spaulding, she said that the two forms of CMT 2D RNAseq...") (current)
- 14:59, 6 February 2018 (diff | hist) . . (+8) . . Debbie and Malcolm (current)
- 14:56, 6 February 2018 (diff | hist) . . (+404) . . N How is it connected to FastQC? (Created page with "FastQC is a process of Quality Control evaluation of the RNAseq reads. You can run FastQ data through FastQC to determine how good the reads are. Often, there are some reads t...")
- 14:49, 6 February 2018 (diff | hist) . . (+4) . . Aiko and Jenna (current)
- 14:42, 6 February 2018 (diff | hist) . . (+4) . . Aiko and Jenna
- 12:58, 5 February 2018 (diff | hist) . . (-1) . . Davidson Bio113 Protocols
- 12:57, 5 February 2018 (diff | hist) . . (+107) . . Davidson Bio113 Protocols
- 15:17, 3 February 2018 (diff | hist) . . (+69) . . N Debbie and Malcolm (Created page with "What is the source of our data? Do we have the data we want to use?")
- 15:16, 3 February 2018 (diff | hist) . . (+57) . . N Stephanie and Ky (Created page with "What does Timmomatic do? How is it connected to FastQC?")
- 15:16, 3 February 2018 (diff | hist) . . (-6) . . Owen and Vivienne
- 15:15, 3 February 2018 (diff | hist) . . (+54) . . N Aiko and Jenna (Created page with "What does TopHat do? How does it differ from HISAT2?")
- 15:13, 3 February 2018 (diff | hist) . . (+59) . . N Jonah and Itzy (Created page with "What does Cuffdiff do? How is it different from DESeq2?")
- 15:12, 3 February 2018 (diff | hist) . . (+4) . . Owen and Vivienne
- 15:12, 3 February 2018 (diff | hist) . . (+59) . . N Owen and Vivienne (Created page with "Find out what Cufflinks does. How does it compare to HTSeq?")
- 20:41, 1 February 2018 (diff | hist) . . (+4) . . Golden Gate Assembly for Bio113
- 20:37, 1 February 2018 (diff | hist) . . (+17) . . Golden Gate Assembly for Bio113
- 20:37, 1 February 2018 (diff | hist) . . (-33) . . Golden Gate Assembly for Bio113
- 20:36, 1 February 2018 (diff | hist) . . (-37) . . Golden Gate Assembly for Bio113
- 14:42, 23 January 2018 (diff | hist) . . (+23) . . N Malcolm Campbell (Created page with "wow, I have a wiki page")
- 13:46, 21 January 2018 (diff | hist) . . (+55) . . Electroporation Transformation (current)
- 13:36, 18 January 2018 (diff | hist) . . (+714) . . Mouse Charcot-Marie-Tooth type 2D RNAseq Project
- 20:13, 8 January 2018 (diff | hist) . . (+88) . . N Mouse Charcot-Marie-Tooth type 2D RNAseq Project (Created page with "This is the page for Bio343 at Davidson College, spring 2018. more information to come")
- 20:13, 8 January 2018 (diff | hist) . . (+69) . . Main Page
- 22:35, 15 November 2017 (diff | hist) . . (+80) . . Sequence DNA for Bio113 (→Sequencing Your Plasmid DNA to Confirm Cloned DNA Sequence)
- 19:45, 9 November 2017 (diff | hist) . . (+1) . . Nanodrop DNA for Bio113
- 19:28, 9 November 2017 (diff | hist) . . (-1) . . Miniprep Plasmid DNA for Bio113
- 21:24, 6 November 2017 (diff | hist) . . (+10) . . Sequence DNA for Bio113
- 21:23, 6 November 2017 (diff | hist) . . (+29) . . Sequence DNA for Bio113 (→Sequencing Your Plasmid DNA to Confirm Cloned DNA Sequence)
- 19:02, 2 August 2017 (diff | hist) . . (+135) . . PCR for Bio113
- 18:55, 2 August 2017 (diff | hist) . . (+8) . . PCR for Bio113
- 16:13, 19 July 2017 (diff | hist) . . (+10) . . APe Sequence Analysis (→ApE Software for DNA Sequence Analysis)
- 16:13, 19 July 2017 (diff | hist) . . (+228) . . APe Sequence Analysis (→ApE Software for DNA Sequence Analysis)
- 16:11, 19 July 2017 (diff | hist) . . (+11) . . APe Sequence Analysis
- 16:10, 19 July 2017 (diff | hist) . . (+6) . . APe Sequence Analysis (→ApE Software for DNA Sequence Analysis)
- 16:09, 19 July 2017 (diff | hist) . . (-4) . . APe Sequence Analysis (→ApE Software for DNA Sequence Analysis)
- 16:09, 19 July 2017 (diff | hist) . . (0) . . N File:Chromatab1.png (current)
- 16:09, 19 July 2017 (diff | hist) . . (+445) . . APe Sequence Analysis
- 16:04, 19 July 2017 (diff | hist) . . (0) . . N File:Aligning.png (current)
- 16:04, 19 July 2017 (diff | hist) . . (+928) . . APe Sequence Analysis
- 15:49, 19 July 2017 (diff | hist) . . (+1) . . Gel Electrophoresis for Bio113 (current)
- 15:49, 19 July 2017 (diff | hist) . . (+77) . . Gel Electrophoresis for Bio113
- 15:48, 19 July 2017 (diff | hist) . . (+34) . . APe Sequence Analysis
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