Difference between revisions of "Summer 2014 SynBio Project (Davidson and MWSU)"
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| + | === Final Presentations at End of Summer === | ||
| + | * [[File:Math wrap-up.pptx]] | ||
| + | * [[File:Joint_planning_-_Liquid_Broth.pptx]] | ||
| + | * [[fitness genes]] | ||
| + | * [[tClone/ammeline]] | ||
| + | * [[Optimal Cloning Insert]] | ||
| + | * [[Future Fitness Modules]] | ||
| + | |||
| + | === Presentations during MWSU visit to Davidson === | ||
| + | |||
Central Dogma presentation [[File:Central_dogma.pptx]] | Central Dogma presentation [[File:Central_dogma.pptx]] | ||
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Repressilator modeling Netlogo file [[File:Repressilator_mod.nlogo.zip]] | Repressilator modeling Netlogo file [[File:Repressilator_mod.nlogo.zip]] | ||
| − | Chaperone plasmid DNA sequences [[File: | + | === Biology Files === |
| + | |||
| + | Chaperone plasmid DNA sequences [[File:Chaperone_plasmid_DNA_sequences.docx]] | ||
| + | |||
| + | Origin PCR Gels 5-26-14[[File:5-26-14 Orig PCR Elecpho Gel Pic.doc]] | ||
| + | |||
| + | Chaperone PCR and Repeat Origin PCR 5-27-14[[File:5-27-14_Chap_PCR_and_Repeat_Ori_PCR.doc]] | ||
| + | |||
| + | Chaperone PCR of original clones 5-27-14[[File:5-27-14_chaperone_pcr_clones_1-24.doc]] | ||
| + | |||
| + | Origin PCR of original clones 5-27-14[[File:5-27-14 Ori PCR 1-24.doc ]] | ||
| + | |||
| + | New Chap PCR clones 1-5[[File:5-28-14_New_Chap_PCR_1-5.doc ]] | ||
| + | |||
| + | Combinations Labeling System [[File:Labeling.xlsx]] | ||
| + | |||
| + | ThyA Fitness Module [[File:ThyA fitness module.docx]] | ||
| + | |||
| + | Alternative Riboswitches[[File:Alternative Riboswitches.docx]] | ||
| + | |||
| + | Origin PCR Pictures 6-5-14 [[File:6-5-14 Origin PCR.docx]] | ||
| + | |||
| + | Chaperone PCR PA 6-5-14 [[File:6-5-14 Chaperone PCR.docx]] | ||
| + | |||
| + | Broth Growth Experiments [[File:Broth Growth Experiment Reports Revised.docx]] | ||
| + | ===Sub-pages on various topics=== | ||
| + | |||
| + | |||
| + | |||
''' | ''' | ||
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[[Ramping up Programmed Evolution]] | [[Ramping up Programmed Evolution]] | ||
| + | |||
| + | [[Rational Design of Riboswitches: papers to read]] | ||
| + | |||
| + | [[ThyA Fitness Module]] | ||
| + | |||
| + | [[Caffeine Disk Replication Data]] | ||
| + | |||
| + | === Programmed Evolution Paper === | ||
| + | |||
| + | [[References]] | ||
| + | |||
| + | [[References 2015]] | ||
Latest revision as of 15:42, 3 February 2015
Contents
Final Presentations at End of Summer
- File:Math wrap-up.pptx
- File:Joint planning - Liquid Broth.pptx
- fitness genes
- tClone/ammeline
- Optimal Cloning Insert
- Future Fitness Modules
Presentations during MWSU visit to Davidson
Central Dogma presentation File:Central dogma.pptx
PCR presentation File:PCR.pptx
Cloning presentation File:Cloning.pptx
Riboswitch presentation File:Riboswitch function.pptx
Agent based modeling presentation File:AgentBased Modeling.pptx
Competition presentation File:Competition Modeling.xlsx
Programmed evolution presentation File:Programmed Evolution.pdf
Caffeine results File:Caffeine Disk.pptx
Ammeline presentation File:Ammeline.pptx
Repressilator modeling exercises File:Repressilator modeling.docx
Repressilator modeling Excel file File:Repressilator model.xls
Repressilator modeling Netlogo file File:Repressilator mod.nlogo.zip
Biology Files
Chaperone plasmid DNA sequences File:Chaperone plasmid DNA sequences.docx
Origin PCR Gels 5-26-14File:5-26-14 Orig PCR Elecpho Gel Pic.doc
Chaperone PCR and Repeat Origin PCR 5-27-14File:5-27-14 Chap PCR and Repeat Ori PCR.doc
Chaperone PCR of original clones 5-27-14File:5-27-14 chaperone pcr clones 1-24.doc
Origin PCR of original clones 5-27-14File:5-27-14 Ori PCR 1-24.doc
New Chap PCR clones 1-5File:5-28-14 New Chap PCR 1-5.doc
Combinations Labeling System File:Labeling.xlsx
ThyA Fitness Module File:ThyA fitness module.docx
Alternative RiboswitchesFile:Alternative Riboswitches.docx
Origin PCR Pictures 6-5-14 File:6-5-14 Origin PCR.docx
Chaperone PCR PA 6-5-14 File:6-5-14 Chaperone PCR.docx
Broth Growth Experiments File:Broth Growth Experiment Reports Revised.docx
Sub-pages on various topics
Catherine Doyle Thesis Materials
Repeating 20 Clone Experiments
Extending theophylline application
Ramping up Programmed Evolution
Rational Design of Riboswitches: papers to read
Caffeine Disk Replication Data
