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  1. Haloferax californiae‏‎ (2 revisions)
  2. Template Preparation for RT-qPCR‏‎ (2 revisions)
  3. Drew Krueger‏‎ (2 revisions)
  4. BioBrick Digestions for Fragment and Vector Preparation‏‎ (2 revisions)
  5. For Thomas Niemasik‏‎ (2 revisions)
  6. Catherine Doyle's Notebook‏‎ (2 revisions)
  7. Synergy Machine Protocol for Bio113‏‎ (2 revisions)
  8. Optimal Cloning Plasmid Insert‏‎ (2 revisions)
  9. J-GGA Scaffold 2.0 Design‏‎ (2 revisions)
  10. Gaps‏‎ (2 revisions)
  11. Quorum Sensing‏‎ (2 revisions)
  12. Relevant Information‏‎ (2 revisions)
  13. Davidson Missouri W/Nickolaus Morton‏‎ (2 revisions)
  14. "random number" generators‏‎ (2 revisions)
  15. Transfer function model‏‎ (2 revisions)
  16. Ribosomal Binding Site Conservation‏‎ (2 revisions)
  17. Stephanie and Ky‏‎ (2 revisions)
  18. March 17, 2016‏‎ (2 revisions)
  19. 2/18‏‎ (2 revisions)
  20. Wcdseq pLuxprime VR‏‎ (2 revisions)
  21. Catherine Doyle Thesis Materials‏‎ (2 revisions)
  22. Conserved hypothetical protein TIGR00162 (Megan Reilly)‏‎ (2 revisions)
  23. Helpful wiki sites‏‎ (2 revisions)
  24. Mathematics/Netlogo Models‏‎ (2 revisions)
  25. Electroporation - Campbell Old School Method‏‎ (2 revisions)
  26. What school districts do we have access to?‏‎ (2 revisions)
  27. February 25, 2016‏‎ (2 revisions)
  28. CellularMemory:Positive/Negative Feedback Models‏‎ (2 revisions)
  29. How has 3SAT been addressed with a DNA computer? Can we use those methods?‏‎ (2 revisions)
  30. NHE Feb 9 Notes‏‎ (2 revisions)
  31. Discuss need for delayed growth (common problem with many projects in the past)‏‎ (2 revisions)
  32. Washing Beads‏‎ (2 revisions)
  33. Camille + Daniel‏‎ (2 revisions)
  34. Haloferax mediterranei‏‎ (2 revisions)
  35. Number of steps in proposed network pathways‏‎ (2 revisions)
  36. Biological Examples of random processes‏‎ (2 revisions)
  37. Davidson Missouri W/Karmella Haynes‏‎ (2 revisions)
  38. WEEK ONE (January 17 - 20)‏‎ (2 revisions)
  39. J-GGA Scaffold 2.0 Sequence‏‎ (2 revisions)
  40. DM Notes 1.28.16‏‎ (2 revisions)
  41. Literature summary‏‎ (2 revisions)
  42. DM Notes 3.22.16‏‎ (2 revisions)
  43. March 22, 2016‏‎ (2 revisions)
  44. Test‏‎ (2 revisions)
  45. Proteases‏‎ (2 revisions)
  46. Grace‏‎ (2 revisions)
  47. Daniel‏‎ (2 revisions)
  48. Davidson Missouri W/Lambda model‏‎ (2 revisions)
  49. Jan 12 Notes‏‎ (2 revisions)
  50. Repressilator‏‎ (2 revisions)
  51. DM Notes 2.02.16‏‎ (2 revisions)
  52. Haloferax mucosum FASTA sequence‏‎ (2 revisions)
  53. DM Notes 3.24.16‏‎ (2 revisions)
  54. 2/25‏‎ (2 revisions)
  55. Grace H + Drew‏‎ (2 revisions)
  56. Score‏‎ (2 revisions)
  57. MAGIC Tool Development‏‎ (2 revisions)
  58. IPCR‏‎ (2 revisions)
  59. Davidson Missouri W/Lane H. Heard‏‎ (2 revisions)
  60. Other processes‏‎ (2 revisions)
  61. Figure 1.‏‎ (2 revisions)
  62. 1 glycosylase‏‎ (2 revisions)
  63. March 24, 2016‏‎ (2 revisions)
  64. Paul + Eric‏‎ (2 revisions)
  65. Future Fitness Modules‏‎ (2 revisions)
  66. Davidson‏‎ (2 revisions)
  67. May 28, 2014‏‎ (2 revisions)
  68. Davidson Missouri W/Laurie Heyer‏‎ (2 revisions)
  69. J-GGA Scaffold Primers‏‎ (2 revisions)
  70. File‏‎ (2 revisions)
  71. Comparison of Each Enzyme's Protein Sequences using blastp and clustalW. . .‏‎ (2 revisions)
  72. LongAmp PCR‏‎ (2 revisions)
  73. March 31, 2016‏‎ (2 revisions)
  74. Davidson Missouri W/Double Digest Guide‏‎ (2 revisions)
  75. Debbie and Malcolm‏‎ (2 revisions)
  76. Phage Proteins‏‎ (2 revisions)
  77. GCAT Library of Quality Parts‏‎ (2 revisions)
  78. MATH for melamine‏‎ (2 revisions)
  79. WEEK SIX (February 20 - 24)‏‎ (2 revisions)
  80. Restoration: Amplification Gate‏‎ (2 revisions)
  81. 2/04/16‏‎ (2 revisions)
  82. Ruby on Rails‏‎ (2 revisions)
  83. Natural vs. synthetic proposed pathways‏‎ (2 revisions)
  84. What are other available reverse transcriptases?‏‎ (2 revisions)
  85. JP Mar 15 16‏‎ (2 revisions)
  86. Grace L + Jack‏‎ (2 revisions)
  87. TRNA Genes‏‎ (2 revisions)
  88. Implementing Recommendations for Introductory Biology by Writing a New Textbook‏‎ (2 revisions)
  89. Restoration: Thresholding Gate‏‎ (2 revisions)
  90. Davidson Missouri W/Amanda Valencia‏‎ (2 revisions)
  91. Papers about randomness‏‎ (2 revisions)
  92. Caroline‏‎ (2 revisions)
  93. Jonah and Itzy‏‎ (2 revisions)
  94. SOC Protocol for Transformations‏‎ (2 revisions)
  95. DM Notes 4.7.16‏‎ (2 revisions)
  96. WEEK FIFTEEN (April 23 - 27)‏‎ (2 revisions)
  97. Blasting Spacers for Haloferax mediterranei‏‎ (2 revisions)
  98. Protocol Options‏‎ (2 revisions)
  99. Davidson Missouri W/Matthew Unzicker‏‎ (2 revisions)
  100. NHE Feb 23 Notes‏‎ (2 revisions)
  101. 5). Find these genes in the other 8 genomes of halophiles that have been annotated and the closely related halophiles as indicated by Dr. C's phylogenetic tree‏‎ (2 revisions)
  102. Haloarcula vallismortis Blast Results‏‎ (2 revisions)
  103. NHE Mar 17 Notes‏‎ (2 revisions)
  104. Davidson Missouri W/Jeff Poet‏‎ (2 revisions)
  105. Analog computing‏‎ (2 revisions)
  106. MWSU Freezer Parts‏‎ (2 revisions)
  107. Davidson Missouri W/Michelle Ritter‏‎ (2 revisions)
  108. Haloarcula vallismortis Blasting Results for Virus 3‏‎ (2 revisions)
  109. Links‏‎ (2 revisions)
  110. DM Notes 2.23.16‏‎ (2 revisions)
  111. Davidson Missouri W/Tom Crowley‏‎ (2 revisions)
  112. 2/11/16‏‎ (2 revisions)
  113. JP Jan 12 16‏‎ (2 revisions)
  114. Catherine Doyle's Lab Notebook‏‎ (2 revisions)
  115. Julia Jan 12‏‎ (2 revisions)
  116. DNA Sequencing at Eurofins‏‎ (2 revisions)
  117. Test pLuxR/cI‏‎ (2 revisions)
  118. Group 1 Liver‏‎ (2 revisions)
  119. How does it compare to HTSeq?‏‎ (2 revisions)
  120. Davidson - Melamine Deaminase‏‎ (2 revisions)
  121. 7) Two 'other' RNA genes‏‎ (2 revisions)
  122. Present Hybrid Promoter Designs cartoon fashion (3 major different types)‏‎ (2 revisions)
  123. Brian‏‎ (3 revisions)
  124. DM Notes 1.21.16‏‎ (3 revisions)
  125. NHE Feb 4 Notes‏‎ (3 revisions)
  126. JavaScript‏‎ (3 revisions)
  127. BioBrick Ligations‏‎ (3 revisions)
  128. Promoter Strength Metric‏‎ (3 revisions)
  129. Morgan‏‎ (3 revisions)
  130. Plasmid Creation‏‎ (3 revisions)
  131. Jack‏‎ (3 revisions)
  132. Davidson Missouri W/Oyinade Adefuye‏‎ (3 revisions)
  133. 1) Sugar metabolism‏‎ (3 revisions)
  134. Riboswitch‏‎ (3 revisions)
  135. March 2, 2010‏‎ (3 revisions)
  136. What is msDNA?‏‎ (3 revisions)
  137. Shamita Punjabi Notebook‏‎ (3 revisions)
  138. NHE Jan 12 Notes‏‎ (3 revisions)
  139. Ethanol Precipitation of Vector DNA‏‎ (3 revisions)
  140. Jenna Reed‏‎ (3 revisions)
  141. Mitochondrial/Chloroplast Separation‏‎ (3 revisions)
  142. Nystatin Plates‏‎ (3 revisions)
  143. Ladder problems‏‎ (3 revisions)
  144. Davidson Missouri W/Primer dimer‏‎ (3 revisions)
  145. 1 exonuclease‏‎ (3 revisions)
  146. Ethics and Philosophy of SynBio‏‎ (3 revisions)
  147. Can we redesign the normal msDNA pathway to produce new segments of DNA of our choosing?‏‎ (3 revisions)
  148. Primer Design for the eCDM8 and RFP‏‎ (3 revisions)
  149. Hypothetical Protein 644029933 (Olivia Ho-Shing)‏‎ (3 revisions)
  150. Mnt/Lac‏‎ (3 revisions)
  151. Control of Gene Expression to Fit Model‏‎ (3 revisions)
  152. My Notes‏‎ (3 revisions)
  153. CAT Status‏‎ (3 revisions)
  154. Haloarcula sinaiiensis 33800‏‎ (3 revisions)
  155. Notes 2/23/16‏‎ (3 revisions)
  156. NHE Jan 21 Notes‏‎ (3 revisions)
  157. Paper Notes‏‎ (3 revisions)
  158. IGEM2008‏‎ (3 revisions)
  159. Nanodrop DNA for Bio113‏‎ (3 revisions)
  160. What naming system are we going to use for the suppressor tRNAs?‏‎ (3 revisions)
  161. Davidson's Suggestions‏‎ (3 revisions)
  162. Haloarcula sp 33799‏‎ (3 revisions)
  163. DM Notes 2.11.16‏‎ (3 revisions)
  164. NHE Jan 26 Notes‏‎ (3 revisions)
  165. Xylose (glucose) isomerase)‏‎ (3 revisions)
  166. GC content of the contigs‏‎ (3 revisions)
  167. Guidelines‏‎ (3 revisions)
  168. How are we going to build the 5-mer BioBricks?‏‎ (3 revisions)
  169. Figure 1. Schematic representation of AND gate.‏‎ (3 revisions)
  170. NHE Mar 10 Notes‏‎ (3 revisions)
  171. Examples of Metabolic Pathways in E.coli‏‎ (3 revisions)
  172. Complete Edge Status‏‎ (3 revisions)
  173. What other math problems (e.g. NP- complete) are accessible to us? Annie Siya Sun‏‎ (3 revisions)
  174. Reducing Background from Double Digested Vector‏‎ (3 revisions)
  175. How do signal sequences/peptides work in bacteria, and how can we use them?‏‎ (3 revisions)
  176. WEEK THIRTEEN (April 9 - 13)‏‎ (3 revisions)
  177. How to compare genome sequences using Katie's webpage‏‎ (3 revisions)
  178. Kin Lau Notebook‏‎ (3 revisions)
  179. What does Cuffdiff do?‏‎ (3 revisions)
  180. Melamine Deaminase‏‎ (3 revisions)
  181. BLASTed‏‎ (3 revisions)
  182. Resuspending Oligos‏‎ (3 revisions)
  183. How to deal with 3 partial genome/EST assemblies‏‎ (3 revisions)
  184. March 10, 2016‏‎ (3 revisions)
  185. Aiko and Jenna‏‎ (3 revisions)
  186. WEEK FOURTEEN (April 16 - 20)‏‎ (3 revisions)
  187. JP Mar 24 16‏‎ (3 revisions)
  188. Improvement of pre-existing Registry parts‏‎ (3 revisions)
  189. JP Apr 07 16‏‎ (3 revisions)
  190. DM Notes 2.25.16‏‎ (4 revisions)
  191. 2 ligases‏‎ (4 revisions)
  192. Electron transfer flavoprotein, alpha subunit (Megan Reilly)‏‎ (4 revisions)
  193. Input that WORKS!‏‎ (4 revisions)
  194. JP Apr 12 16‏‎ (4 revisions)
  195. NHE Mar 8 Notes‏‎ (4 revisions)
  196. Nucleotide Sequences‏‎ (4 revisions)
  197. KCM Preparation‏‎ (4 revisions)
  198. Group 2 Liver‏‎ (4 revisions)
  199. Gel Electrophoresis for Bio113‏‎ (4 revisions)
  200. 9) Light proton pump‏‎ (4 revisions)
  201. Backwards Promotion and read-through transcription‏‎ (4 revisions)
  202. Davidson Missouri W/Will DeLoache‏‎ (4 revisions)
  203. Jan 12‏‎ (4 revisions)
  204. How is it connected to FastQC?‏‎ (4 revisions)
  205. Figure 3. Operation of the molecular computer.‏‎ (4 revisions)
  206. Hybrid promoters designed, constructed, tested‏‎ (4 revisions)
  207. Web pages about randomness‏‎ (4 revisions)
  208. Where is the Synthetic Biology page we want high school teachers to use after the survey?‏‎ (4 revisions)
  209. Chaos‏‎ (4 revisions)
  210. Comments on the draft‏‎ (4 revisions)
  211. Logic Gates: Symbols and Truth Tables‏‎ (4 revisions)
  212. Dylan & Jared‏‎ (4 revisions)
  213. JP Jan 28 16‏‎ (4 revisions)
  214. WEEK SEVEN (February 27 - March 2)‏‎ (4 revisions)
  215. Figure 6. Modularity of the AND gate.‏‎ (4 revisions)
  216. Growth Yield Pathway‏‎ (4 revisions)
  217. Team Commando Tutorial. . .‏‎ (4 revisions)
  218. Amino Acid Sequences‏‎ (4 revisions)
  219. Oligos and Primers‏‎ (4 revisions)
  220. How many copies are carried per cell?‏‎ (4 revisions)
  221. Ben‏‎ (4 revisions)
  222. WEEK ELEVEN (March 26 - 30)‏‎ (4 revisions)
  223. E. nigma Project‏‎ (4 revisions)
  224. What other cool reporters are there? (Discrete On/Off or Continuous) Bryce Szczepanik‏‎ (4 revisions)
  225. Phi80 Integration Protocol‏‎ (4 revisions)
  226. CRISPR resources‏‎ (4 revisions)
  227. Haloarcula vallismortis‏‎ (4 revisions)
  228. DM Notes 2.16.16‏‎ (4 revisions)
  229. Halorhabdus utahensis‏‎ (4 revisions)
  230. Davidson Missouri W/HPP Assembly Plan‏‎ (4 revisions)
  231. GGA for BsmBI‏‎ (4 revisions)
  232. Digital Literacy‏‎ (4 revisions)
  233. DM Notes 2.18.16‏‎ (4 revisions)
  234. Davidson Missouri W/Amber Shoecraft‏‎ (4 revisions)
  235. For Dr. Hales‏‎ (4 revisions)
  236. JP Feb 25 16‏‎ (4 revisions)
  237. Describe cellular communication systems used‏‎ (4 revisions)
  238. 2/9‏‎ (4 revisions)
  239. DM Notes 1.12.16‏‎ (4 revisions)
  240. 5) DNA repair mechanisms‏‎ (4 revisions)
  241. JP Apr 05 16‏‎ (4 revisions)
  242. January 28, 2016‏‎ (4 revisions)
  243. Math Status‏‎ (4 revisions)
  244. Davidson Missouri W/Jessica Treece‏‎ (4 revisions)
  245. Q5 PCR NEB‏‎ (4 revisions)
  246. DM Notes 1.14.16‏‎ (4 revisions)
  247. Lab Notebook‏‎ (5 revisions)
  248. DNA Sequencing at Iowa State University‏‎ (5 revisions)
  249. Pipet Tip Olympic Records‏‎ (5 revisions)
  250. Davidson - Research‏‎ (5 revisions)

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