JP Resources - Revision history

Nielder at 18:15, 17 March 2016

2016-03-17T18:15:54Z

2016-03-17T18:15:33Z

2016-03-17T15:07:01Z

2016-03-17T15:06:52Z

2016-03-17T15:02:56Z

2016-03-17T14:58:32Z

Created page with "Julia Preziosi"

New page

[[Julia Preziosi]]

@@ Line 20: / Line 20: @@
 [[File:clustering2.txt]]
 Stripping repeat GO IDs from contigs and generating list of all IDs
 [[File:GO_term_no_repeat_and_list_PTHONSCRIPT.txt]]
 Sample input file [[File:sample1.txt]]
 Sample output file 1 [[File:sample2.txt]]
 Sample output file 2 [[File:sample3.txt]]

← Older revision		Revision as of 18:15, 17 March 2016
Line 19:		Line 19:
	0.001 Qval with heatmaps		0.001 Qval with heatmaps
	[[File:clustering2.txt]]		[[File:clustering2.txt]]
		+
		+	Stripping repeat GO IDs from contigs and generating list of all IDs
		+	[[File:GO_term_no_repeat_and_list_PTHONSCRIPT.txt]]
		+	Sample input file [[File:sample1.txt]]
		+	Sample output file 1 [[File:sample2.txt]]
		+	Sample output file 2 [[File:sample3.txt]]

@@ Line 5: / Line 5: @@
 making a dictionary of POUF names
 [[File:POUFdict.txt]]
 (uses the file: [[File:refseqpouf.txt]]
 renaming the POUFs in the excel files (not needed)

@@ Line 4: / Line 4: @@
 making a dictionary of POUF names
+[[File:POUFdict.txt]]
 renaming the POUFs in the excel files (not needed)
+[[File:renamer.txt]]
 R Code:
 -1000 expression
 .01 Qval with heatmaps
+[[File:clustering1.txt]]
 -1000 expression
 .001 Qval with heatmaps

← Older revision		Revision as of 15:02, 17 March 2016
Line 1:		Line 1:
	[[Julia Preziosi]]		[[Julia Preziosi]]
		+
		+	Python Codes:
		+
		+	making a dictionary of POUF names
		+
		+
		+	renaming the POUFs in the excel files (not needed)
		+
		+
		+	R Code:
		+	1-1000 expression
		+	0.01 Qval with heatmaps
		+
		+
		+	1-1000 expression
		+	0.001 Qval with heatmaps