Megan's Assignment - Revision history

Mereilly at 20:43, 30 September 2009

2009-09-30T20:43:43Z

2009-09-30T20:36:56Z

‎Degradation of several xenobiotics by Halomicrobium mukohataei

2009-09-30T20:36:19Z

‎Degradation of several xenobiotics by Halomicrobium mukohataei

2009-09-30T20:34:33Z

‎Degradation of several xenobiotics by Halomicrobium mukohataei

2009-09-30T20:33:55Z

‎Degradation of several xenobiotics by Halomicrobium mukohataei

2009-09-30T20:27:42Z

‎Degradation of several xenobiotics by Halomicrobium mukohataei

2009-09-30T20:26:56Z

2009-09-30T20:21:33Z

2009-09-30T20:21:09Z

2009-09-15T16:39:14Z

← Older revision		Revision as of 20:43, 30 September 2009
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	== Benzoate degradation via hydroxylation ==		== Benzoate degradation via hydroxylation ==
		+	<br>
		+
		+	== Caprolactam degradation ==
		+	<br>
		+
		+	== Styrene degradation ==
		+	<br>
		+
		+	== Other potential biodegradable xenobiotics ==
		+	<br>

@@ Line 7: / Line 7: @@
 <li>Styrene degradation</li>
 </ul>
-Possibly others, but either the gaps in other pathways are due to H. mukohataei possessing an alternate gene rather than one that is already known to exist in other genomes, or that a gene has not been identified in any genomes at all and requires wet-lab experiments to determine the sequence of the gene. These unknown genes must exist in several organisms, because the protein that they produce has been identified.
+Possibly others, but either the gaps in other pathways are due to H. mukohataei possessing an alternate gene rather than one that is already known to exist in other genomes, or that a gene has not been identified in any genomes at all and requires wet-lab experiments to determine the sequence of the gene. These unknown genes must exist in several organisms, because the protein that they produce has been identified.<br>

@@ Line 7: / Line 7: @@
 <li>Styrene degradation</li>
 </ul>
 Possibly others, but either the gaps in other pathways are due to H. mukohataei possessing an alternate gene rather than one that is already known to exist in other genomes, or that a gene has not been identified in any genomes at all and requires wet-lab experiments to determine the sequence of the gene. These unknown genes must exist in several organisms, because the protein that they produce has been identified.

@@ Line 2: / Line 2: @@
 KEGG pathways that I have found viable genes for in the H. mukohataei genome:<br>
 <li>Benzoate degradation via hydroxylation</li>
 <li>Caprolactam degradation</li>
 <li>Styrene degradation</li>
 <br>
 Possibly others, but either the gaps in other pathways are due to H. mukohataei possessing an alternate gene rather than one that is already known to exist in other genomes, or that a gene has not been identified in any genomes at all and requires wet-lab experiments to determine the sequence of the gene. These unknown genes must exist in several organisms, because the protein that they produce has been identified.

@@ Line 2: / Line 2: @@
 KEGG pathways that I have found viable genes for in the H. mukohataei genome:<br>
--Benzoate degradation via hydroxylation<br>
+<li>Benzoate degradation via hydroxylation</li>
--Caprolactam degradation<br>
+<li>Caprolactam degradation</li>
--Styrene degradation<br>
+<li>Styrene degradation</li>
 <br>
 Possibly others, but either the gaps in other pathways are due to H. mukohataei possessing an alternate gene rather than one that is already known to exist in other genomes, or that a gene has not been identified in any genomes at all and requires wet-lab experiments to determine the sequence of the gene. These unknown genes must exist in several organisms, because the protein that they produce has been identified.

← Older revision		Revision as of 20:26, 30 September 2009
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−	Degradation of several xenobiotics by Halomicrobium mukohataei	+	== Degradation of several xenobiotics by Halomicrobium mukohataei ==

	KEGG pathways that I have found viable genes for in the H. mukohataei genome:		KEGG pathways that I have found viable genes for in the H. mukohataei genome:

← Older revision		Revision as of 20:21, 30 September 2009
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−		+	Degradation of several xenobiotics by Halomicrobium mukohataei
−	== Degradation of several xenobiotics by Halomicrobium mukohataei
−	==

	KEGG pathways that I have found viable genes for in the H. mukohataei genome:		KEGG pathways that I have found viable genes for in the H. mukohataei genome:

← Older revision		Revision as of 16:39, 15 September 2009
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−	-hydrocarbon metabolism ~~(degradation~~ of ~~pollutants)<br>~~	+	I am particularly interested in our species' ability to degrade organic pollutants (hydrocarbon metabolism). Many pollution sites have high salt concentrations, inhibiting the use of many common bacterial cleaners. However, the use of halophiles may solve this problem...<br>
−	~~-sulfur metabolism<br>~~
−	~~-nitrogen metabolism~~<br>