|
|
(23 intermediate revisions by 3 users not shown) |
Line 1: |
Line 1: |
− | == Found on CRISPRFInder: ==
| + | [[Direct Repeats]] |
| | | |
− | '''Two confirmed CRISPRs:'''
| + | [[Blasting Spacers for Our Genome]] |
| | | |
− | CRISPR id : tmp_1_Crispr_12
| + | [[Spacers for Other Species]] |
− | START crispr position : 2723382 <br>
| |
− | END crispr position : 2725579 <br>
| |
− | Crispr length : 2197 <br>
| |
− | DR consensus : GTTTCAGACGGACCCTTGTGGGATTGAAGC DR length : 30<br>
| |
− | Number of spacers : 33<br>
| |
| | | |
− | CRISPR id : tmp_2_Crispr_1<br>
| + | [[Blasting Spacers for Haloferax mediterranei]] |
− | START crispr position : 31920<br>
| |
− | END crispr position : 34849<br>
| |
− | Crispr length : 2929<br>
| |
− | DR consensus : GCTTCAATCCCACAAGGGTCCGTCTGAAAC DR length : 30<br>
| |
− | Number of spacers : 44<br>
| |
| | | |
− | '''11 Questionable CRISPRs:'''
| + | [[CRISPR-associated Proteins]] |
− | | |
− | CRISPR id : tmp_1_PossibleCrispr_1<br> | |
− | START crispr position : 451036<br>
| |
− | END crispr position : 451146<br>
| |
− | Crispr length : 110<br>
| |
− | DR consensus : CCTCGACCGTGTCGGCCGCGCCGCC DR length : 25<br>
| |
− | Number of spacers : 1<br>
| |
− | | |
− | CRISPR id : tmp_1_PossibleCrispr_2<br>
| |
− | START crispr position : 451266<br>
| |
− | END crispr position : 451422<br>
| |
− | Crispr length : 156<br>
| |
− | DR consensus : CCTCGACCGTGTCGGCCGCGCCGCC DR length : 25<br>
| |
− | Number of spacers : 2<br>
| |
− | | |
− | | |
− | CRISPR id : tmp_1_PossibleCrispr_3<br>
| |
− | START crispr position : 723910<br>
| |
− | END crispr position : 724040<br>
| |
− | Crispr length : 130<br>
| |
− | DR consensus : CCGCCCGAACACGCCGGTCCCGACCACGAGAACGAGAC DR length : 38<br>
| |
− | Number of spacers : 1<br>
| |
− | | |
− | RISPR id : tmp_1_PossibleCrispr_4<br>
| |
− | START crispr position : 775514<br>
| |
− | END crispr position : 775595<br>
| |
− | Crispr length : 81<br>
| |
− | DR consensus : TGATTCGCCCAGCGAGCGCGTTCGTG DR length : 26<br>
| |
− | Number of spacers : 1<br>
| |
− | | |
− | | |
− | CRISPR id : tmp_1_PossibleCrispr_5<br>
| |
− | START crispr position : 1587713<br>
| |
− | END crispr position : 1587871
| |
− | Crispr length : 158<br>
| |
− | DR consensus : TCGAAGGGGCTGTCGCTGTCGGTG DR length : 24<br>
| |
− | Number of spacers : 2<br>
| |
− | | |
− | | |
− | | |
− | CRISPR id : tmp_1_PossibleCrispr_6<br>
| |
− | START crispr position : 1635784<br>
| |
− | END crispr position : 1635940<br>
| |
− | Crispr length : 156<br>
| |
− | DR consensus : CCTCGACCGTGTCGGCCGCGCCGCC DR length : 25<br>
| |
− | Number of spacers : 2<br>
| |
− | | |
− | | |
− | CRISPR id : tmp_1_PossibleCrispr_7<br>
| |
− | START crispr position : 1733154<br>
| |
− | END crispr position : 1733268<br>
| |
− | Crispr length : 114<br>
| |
− | DR consensus : GTTCGCCGGACCGTGTGGGTGTCG DR length : 24<br>
| |
− | Number of spacers : 2<br>
| |
− | | |
− | CRISPR id : tmp_1_PossibleCrispr_8<br>
| |
− | START crispr position : 2087618<br>
| |
− | END crispr position : 2087725<br>
| |
− | Crispr length : 107<br>
| |
− | DR consensus : AGCGCCGGGCGACGACGGGCCAGC DR length : 24<br>
| |
− | Number of spacers : 1<br>
| |
− | | |
− | CRISPR id : tmp_1_PossibleCrispr_9<br>
| |
− | START crispr position : 2127953<br>
| |
− | END crispr position : 2128039<br>
| |
− | Crispr length : 86<br>
| |
− | DR consensus : CGCTCGCTTCGAGGGCCGACACTCGCT DR length : 27<br>
| |
− | Number of spacers : 1<br>
| |
− | | |
− | | |
− | CRISPR id : tmp_1_PossibleCrispr_10<br>
| |
− | START crispr position : 2206888<br>
| |
− | END crispr position : 2206968<br>
| |
− | Crispr length : 80<br>
| |
− | DR consensus : CAGTCCAGTGAGGCGTCTCGTCGTCG DR length : 26<br>
| |
− | Number of spacers : 1<br>
| |
− | | |
− | CRISPR id : tmp_1_PossibleCrispr_11<br>
| |
− | START crispr position : 2293949<br>
| |
− | END crispr position : 2294199<br>
| |
− | Crispr length : 250<br>
| |
− | DR consensus : CGTTCGCAGCAAAACGGGCCGGAAGGGATTTGAACC DR length : 36<br>
| |
− | Number of spacers : 2<br>
| |