Difference between revisions of "Web based genome comparison tool"
From GcatWiki
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*[http://www.broadinstitute.org/annotation/medea/dotplot/ MEDEA] | *[http://www.broadinstitute.org/annotation/medea/dotplot/ MEDEA] | ||
**This is what I want! | **This is what I want! | ||
| + | **At its minimum, the MEDEA Dot Plot only needs JSON formatted data for the sequences and JSON formatted data for alignments. | ||
Revision as of 19:21, 13 September 2011
- JDotter
- A java based tool designed to compare whole genome
- Runs comparison operations locally
- Need a java install thing
- M-GCAT
- in C and Python
- Runs locally from command line??? => could generate on server. Too much work for server?
- MEDEA
- This is what I want!
- At its minimum, the MEDEA Dot Plot only needs JSON formatted data for the sequences and JSON formatted data for alignments.
