Difference between revisions of "Web based genome comparison tool"
From GcatWiki
| Line 9: | Line 9: | ||
**This is what I want! | **This is what I want! | ||
**At its minimum, the MEDEA Dot Plot only needs JSON formatted data for the sequences and JSON formatted data for alignments. | **At its minimum, the MEDEA Dot Plot only needs JSON formatted data for the sequences and JSON formatted data for alignments. | ||
| + | *[http://www.broadinstitute.org/annotation/medea/stackmap/] | ||
| + | **Multigenome comparison tool | ||
Revision as of 16:52, 19 September 2011
- JDotter
- A java based tool designed to compare whole genome
- Runs comparison operations locally
- Need a java install thing
- M-GCAT
- in C and Python
- Runs locally from command line??? => could generate on server. Too much work for server?
- MEDEA
- This is what I want!
- At its minimum, the MEDEA Dot Plot only needs JSON formatted data for the sequences and JSON formatted data for alignments.
- [1]
- Multigenome comparison tool
