Difference between revisions of "Nucleotide Sequences"

Revision as of 21:08, 31 January 2012

Copy and paste the FASTA sequences below into the CLUSTALW text box to conduct a nucleotide alignment between Human, Mouse, and Sharp-Winged Teal Hemoglobin mRNAs.

>gi|31980675|ref|NM_016956.2| Mus musculus hemoglobin, beta adult minor chain (Hbb-b2), mRNA GTTGTGTTGACTTGCAACTTCAGAAACAGACATCATGGTGCACCTGACTGATGCTGAGAAGTCTGCTGTC TCTTGCCTGTGGGCAAAGGTGAACCCCGATGAAGTTGGTGGTGAGGCCCTGGGCAGGCTGCTGGTTGTCT ACCCTTGGACCCAGCGGTACTTTGATAGCTTTGGAGACCTATCCTCTGCCTCTGCTATCATGGGTAATCC CAAGGTGAAGGCCCATGGCAAAAAGGTGATAACTGCCTTTAACGAGGGCCTGAAAAACCTGGACAACCTC AAGGGCACCTTTGCCAGCCTCAGTGAGCTCCACTGTGACAAGCTGCATGTGGATCCTGAGAACTTCAGGC TCCTGGGCAATGCGATCGTGATTGTGCTGGGCCACCACCTGGGCAAGGATTTCACCCCTGCTGCACAGGC TGCCTTCCAGAAGGTGGTGGCTGGAGTGGCCACTGCCCTGGCTCACAAGTACCACTAAGCCCCTTTTCTG CTATTGTCTATGCACAAAGGTTATATGTCCCCTAGAGAAAAACTGTCAAGTGTGGGGAAATGATGAAGAC CTTTGGGCATCTAGCTTTTATCTAATAAATGATATTTACTGTCATCTCAAAAAAAAAAAAAAAAAAAAAA AA

>gi|28302128|ref|NM_000518.4| Homo sapiens hemoglobin, beta (HBB), mRNA ACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCATCTGACTCCTGA GGAGAAGTCTGCCGTTACTGCCCTGTGGGGCAAGGTGAACGTGGATGAAGTTGGTGGTGAGGCCCTGGGC AGGCTGCTGGTGGTCTACCCTTGGACCCAGAGGTTCTTTGAGTCCTTTGGGGATCTGTCCACTCCTGATG CTGTTATGGGCAACCCTAAGGTGAAGGCTCATGGCAAGAAAGTGCTCGGTGCCTTTAGTGATGGCCTGGC TCACCTGGACAACCTCAAGGGCACCTTTGCCACACTGAGTGAGCTGCACTGTGACAAGCTGCACGTGGAT CCTGAGAACTTCAGGCTCCTGGGCAACGTGCTGGTCTGTGTGCTGGCCCATCACTTTGGCAAAGAATTCA CCCCACCAGTGCAGGCTGCCTATCAGAAAGTGGTGGCTGGTGTGGCTAATGCCCTGGCCCACAAGTATCA CTAAGCTCGCTTTCTTGCTGTCCAATTTCTATTAAAGGTTCCTTTGTTCCCTAAGTCCAACTACTAAACT GGGGGATATTATGAAGGGCCTTGAGCATCTGGATTCTGCCTAATAAAAAACATTTATTTTCATTGC

>gi|254770623|gb|GQ272201.1| Anas flavirostris oxyptera voucher LSUMZ:B8251 hemoglobin beta A subunit (HBB) gene, complete cds ATGGTGCACTGGACAGCCGAGGAGAAGCAGCTCATCACCRGCCTCTGGGGCAAGGTCAATGTGGCCGACT GTGGTGCTGAGGCCCTGGCCAGGTAGGTTCGGCTCCCGGGCATCGGCTCGGCTGCATCTGCATGGAGAAA CCGCTGCAGGCACAGGAGGGAGCATTAACGGGGTGTGTGTGCTTCTCCCCCCTTCTCTCTGCAGGCTGCT GATCGTCTACCCCTGGACCCAGAGGTTCTTCGCCTCCTTCGGCAACCTGTCCAGCCCCACCGCCATCCTT GGCAACCCCATGGTCCGYGCCCATGGCAAGAAAGTGCTCACCTCCTTCGGAGATGCCGTGAAGAACCTGG ACAACATCAAGAACACCTTTGCCCAGCTGTCCGAGCTGCACTGCGACAAGCTGCACGTGGACCCCGAGAA CTTCAGGGTGAGCCACACTCCTGGCCAGGGCACCCATCCCCATGCATCTCCATGGGGAGTTTCTCCCCAT GCCCCCAGGCCATGTCCCCAGTCCCACAGGTGGGGACTCCCTGTAGATATGCCAGTGCTGGAGGAAGAGA AGCTGGTGGTCGAGGCAAGGGGCAGAACTGGGAGGAGAGGCAGGGAAGGGACCCACATGGAGCTTGGGGA GAAAGGACCAAAGGGGCCGAAGGGGCCATAGGGAGGGTGAAAGCAAGGATACAAGGGGGCAGGAAAGGCG GTGAGGAGGTGGCTGCAGCGCGGAAAGGGAGGGGGAGCGTAAAGTGAAAGCAGTTGTTGGAGCAGGAAGA GGTCTGAGCTAAGGGGAAAGCAAAGGAGCAAGAGCGAAACCTGGCGTGGAGGAGAAAGGAGAGAGGAGTG ATGAGCAAGAGACAGTGGCTAGATGCCAACAGCCAAAGAGGAGTGGGGCATAGAGGGAGAGAGAAGTTTT GTTCCCGCATCTCTGCAGATGAGAGTCTCCCGGTGGGGTAGGAGACCCAGCACTTGTCACTGGGGCTGGC TGGGATCCCCCCATGCCAGTGGGAGCTTGCCCTTGGTGCCAGGGTGCTTTGCACGTGCCAGCTCCCTGCT GCTCAGCAGACGCTCAGCTCTGCCTCCTGCTCGGGAGAACTCCCAAATGAAGGCAGAAGGGAGAAAAAAT TTATCAACAGAATTGTTGGAGAATTTTTGGTTACTCATCCCATACCAGTAGCAAGGGGAAGAAATATGGC CTGGGATCAGTGGTTGAGATGAAAAGCTTTGGAGTCAGTGGCCCAGACTAAACAGGGGCTGGTGCATTTC GTGTGTTGTACATTTTGTGATTTAGACTGAACAAGAGGATTAATGAGTTTAAGGTACATCTTTAAAAGGG CTGCAGTTTGCGGGGAGATTTTTAAGCCTACAAACGCCTGTAGGTTCCCCTGGGGCTGGTGCAAGTGTTG GTGCGGGGATCAGCAGTCTCCCGGGCACTGTTAACCAGGGGTGCTCATGTTCCCACAGCTCCTGGGTGAC ATCCTCATCATCGTCCTGGCCTCCCACTTCACCAAGGATTTCACTCCTGAATGCCAGGCTGCCTGGCAGA AGATGGTCCGCGTGGTGGCCCACGCTCTGGCCCGCAAGTACCACTAA

@@ Line 1: / Line 1: @@
->644033060 deoxyribodipyrimidine photolyase [Halomicrobium mukohataei DSM 12286, unfinished sequence: NZ_ABTY01000002] (+)strand
+Copy and paste the FASTA sequences below into the CLUSTALW text box to conduct a nucleotide alignment between Human, Mouse, and Sharp-Winged Teal Hemoglobin mRNAs.
-ATGAGCGACGGGCCGACAGCGGTGACACCCGACGCCGACGACGTGCCGAC
-GACGACGGACGGCTGTGTCGTCTGGCACCGCCGCAATCTCCGGACGACCG
-ACCACGGCGCGCTCTCGTACGCGGGCGAGGAGTACGACACCGTCTTGCCG
-CTGTTCGTCTTCGACCCGCAGTTCTACGGTAACGACGGACTCGCCTGTGA
-CGCCAGACTCCTCCTCCTCCACGAGTCCGTCGAGAGTCTCCGGCGACTGT
-ACGAGGCTGTCGGGGGAACGCTCAGCTACGCCCACGGTGATCCGCTGTCG
-GTGCTCTCGGCTCTGGCAGCGGCCGGCTGGGACATCGTCGCGACGGCCGA
-CCCGACCGCACGCTACGGGCGTCAGCGAGACGACCGGGCCGCGGCACACT
-GTGACGTGCGCTTCGTCGACAGTGACGGGCTGGTTCGAGACCAGGCGTGG
-CCGCGTGCGGGGTGGAGCGACCGCGTCGAGGCGTGGTTCGAGTCGTCGCC
-CCACTCCTGGGACCCGGCCGACGTTTCGTTCGCCTCGCTGCCGGGGACGG
-TGTCCGTCGCCGATATCGAGCGTACGTACGACGTACACGCGGCGAAGACG
-ACGGTCCCACCCGGCGGCCGAGCGGCGGGGGCCAGACGACTCCGACAGTT
-CGTCGCAGACATCGAGCAGTATCCCGGCAACATCTCCGCGCCGACAGACG
-CACGGACCGGTACCAGCGGGCTCTCGCCGCACCTCCGGTTCGGATCGCTG
-TCGGTACGGGAAGTCTACCGGTACGTGATGGACAACGCACCGCCGTGTAC
-CGGCCGCGAGATGTTCGTCTCCAGGCTCTACTGGAACAAACACTACCACC
-AGAAACTGGAAGACTGGAGCGGCTGGACGACGACGGCGGTCAACCCCGCA
-ATGCGAGGGTGTCGGGCGGAGTCACACGACCCCGAGCTGGTGACTGCCTG
-GAAGCGGGGGACCACCGGCTTTCCCATGGTCGACGCGTCCATGCGGTGTC
-TCGTCGAGACCGGGTGGCTCAACTTCCGGATGCGAGCGATGTGTGCGAGC
-GTCTTCGCCGACCTGTTCCAGCAGCCCTGGCAGATCGGCGCGGACTTCTA
-TCACTACCACCTGATCGACGCCGATCCGGCGATAAACTACACCCAGTGGC
-AGTCACAGGCCGGTACGGTCGGAACGAACCTCATGCGCATCTACAACCCG
-ATCAAACAGGTGCGTGACAACGATCCCGACGGCACGTTCGTCTCGACGTA
-CGTCCCGGAACTGGCTCCTCTCCCGGCCGAGTACCTGCCACGCCCCGAAA
-AGACACCGCTCCACGTTCAGGAAGCGTGTGGCGTCGAGATCGGCACGGAC
-TATCCGTACCCCGTCGTCGAGTACGAGGCAGCCAGACAGCGTGCGATCGA
-GCGCTACGAACGTCTCGAACCGGCCGCCCGCCAGGCCCTCCAAGAGCCGG
-CGGTCGCTCGACGAGCGTCACTGTCCTCGCAGTCACGGCCACCGGACGGG
-TCGGACGACACGTCGACGGTGACCGAAGCGGGTCCACAGCAGCGCGGCCT
-GGACGCGTACACGGAGACAGACAAGGAGTGA
->644032076 DNA repair photolyase [Halomicrobium mukohataei DSM 12286, unfinished sequence: NZ_ABTY01000001] (-)strand
-ATGCTCGATGACCGTGCCGATGTCGACGACCCACAGCAAGACTGGGGTGA
-CTACCTGCTCTACCGTGACGATCTCCCCGAGCGTGTTCAGCGAGGACTAG
-AGGAAACTGACTTCCAGAACTGGAAGACCACCGACCGTGGGCGGGGTATC
-GTCATGCTCTCCAGCGGGACAGACTGCTACCAGGACCGACGGGCCGCACA
-GATCACACGCGGTTGTGTTCATGAACTCATCGAGCATGATATCCCGACTC
-GGATACTCACCCGCAGTCCGAACGTTACCCGCGACATCGACCTTTTCAAA
-CAGGCCAATGGGTCTCTCACTGTAGGGTCCTCCATCCCGAGTTTCGATAC
-ATCCTTGATTAGTGTCCTTGAGCCAAACGCCCCTCCACCTATGGCTCGAT
-GGGAGGCACTGAACGAATTGTTCAAAGCTGGAGTCCCGCGCTTCGTATCG
-TTCTCGCCCACCTATCCGACGATGGGTCGGGAGGATATTCACGAGGCACT
-TAGCTGGTTCTCCGCCATTGATCCCGAAGTGGTCTTCCACGAGCCAATAA
-ACCCTCGTGGGATCAATTTCGAAATGTGTATCGAGGCACTGGAGGACGAG
-GGATTAGAGTCTGAAGCGGACGAATTCCGAAAACTGCAGCGTCAAGGGAA
-ATGGGTGGATTACGCGCTCGACCAGATCGAAATGGTTCGCGACGTAGCAA
-CTCATTTCGAGAATATTACTATCCATACCTGGCCCGGTCGTGATCTGATT
-GAGGCAACTAACGGCACTCAGCAAAGGAAATTCAAGCAGATGCGTCGACA
-GATATCCCCAGAACCGTTTGCGGAGTAG
->644030931 deoxyribodipyrimidine photolyase-related protein [Halomicrobium mukohataei DSM 12286, unfinished sequence: NZ_ABTY01000001] (-)strand
+>gi|31980675|ref|NM_016956.2| Mus musculus hemoglobin, beta adult minor chain (Hbb-b2), mRNA
-ATGACCGTGCTGGTGCTGGGCGACCAGCTGTCCCGGCGATTCGGTCCACT
+GTTGTGTTGACTTGCAACTTCAGAAACAGACATCATGGTGCACCTGACTGATGCTGAGAAGTCTGCTGTC
-CGCCGACCGGCCCGACGACCGCGTGGTGATGATCGAGTCCAGCGGTTTCC
+TCTTGCCTGTGGGCAAAGGTGAACCCCGATGAAGTTGGTGGTGAGGCCCTGGGCAGGCTGCTGGTTGTCT
-TCCGTCGGTTACCCTACCATCCGCACAAGCCGACGCTCGTGTTCAGTGCG
+ACCCTTGGACCCAGCGGTACTTTGATAGCTTTGGAGACCTATCCTCTGCCTCTGCTATCATGGGTAATCC
-ATGCGTCACTTCCGGGACGCGTTGCGCGAGGCGGGCCGGACCGTCGACTA
+CAAGGTGAAGGCCCATGGCAAAAAGGTGATAACTGCCTTTAACGAGGGCCTGAAAAACCTGGACAACCTC
-CTACCGAGCGGAGACGTTCGAGGACGGGTTCGAGACACACTTCGAGCGAC
+AAGGGCACCTTTGCCAGCCTCAGTGAGCTCCACTGTGACAAGCTGCATGTGGATCCTGAGAACTTCAGGC
-ATCCCGACGACGATCTCGTGACGATGACCCCGGCGAGTCACGGCGGCACC
+TCCTGGGCAATGCGATCGTGATTGTGCTGGGCCACCACCTGGGCAAGGATTTCACCCCTGCTGCACAGGC
-GAGCGGCTGCGGACGCTGATCGAGCGACACGGCGGGACGCTCACGACGGT
+TGCCTTCCAGAAGGTGGTGGCTGGAGTGGCCACTGCCCTGGCTCACAAGTACCACTAAGCCCCTTTTCTG
-GCCGGACGAGCGGTTCCTCTGTGCGCCAGGGACGTTCGACGAGTGGACGG
+CTATTGTCTATGCACAAAGGTTATATGTCCCCTAGAGAAAAACTGTCAAGTGTGGGGAAATGATGAAGAC
-ACGGTCCGCCGTACCGTCACGAGTCGTTCTACCGATCGATGCGTCGGGAG
+CTTTGGGCATCTAGCTTTTATCTAATAAATGATATTTACTGTCATCTCAAAAAAAAAAAAAAAAAAAAAA
-ACCGGCTATCTGATGGACGGCGACGACCCGGTCGGTGGCGAGTGGAACTA
+AA
-CGACGAGCAGAACCGCGAGACGCCGCCCGACGAGTGGGAGCCCCCGACGG
-TGCCGACGTTCGAGCCCGACGAGACGACGCGTCGGGTCCAGTCGTGGGTC
+>gi|28302128|ref|NM_000518.4| Homo sapiens hemoglobin, beta (HBB), mRNA
-CGCGACCACCACGACGGAGGCTACGAGGAAGCGCCCTACGGCGGTGACTG
+ACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCATCTGACTCCTGA
-GGCCGATCCGGAGCCGTTCCGGTGGCCGGTGACGCGACAGCAAGCCCGCC
+GGAGAAGTCTGCCGTTACTGCCCTGTGGGGCAAGGTGAACGTGGATGAAGTTGGTGGTGAGGCCCTGGGC
-GAGCGCTGGACGCGTTCGTCGAGGACCGCCTCGCCGACTTCGGGGCGTAT
+AGGCTGCTGGTGGTCTACCCTTGGACCCAGAGGTTCTTTGAGTCCTTTGGGGATCTGTCCACTCCTGATG
-CAGGACGCGATGGTCGAGAGCGAGTGGGCGATGGCTCACAGCCTGCTGTC
+CTGTTATGGGCAACCCTAAGGTGAAGGCTCATGGCAAGAAAGTGCTCGGTGCCTTTAGTGATGGCCTGGC
-GACTTCGCTGAACCTCGGACTGCTGGGGCCCGCGGAGGTCGTCGAGCGCG
+TCACCTGGACAACCTCAAGGGCACCTTTGCCACACTGAGTGAGCTGCACTGTGACAAGCTGCACGTGGAT
-CGATCGAGGCCTACGAGGCCGGCGACGCACCGCTGCACAGCGTCGAGGGG
+CCTGAGAACTTCAGGCTCCTGGGCAACGTGCTGGTCTGTGTGCTGGCCCATCACTTTGGCAAAGAATTCA
-TTCGTCCGGCAGGTGATCGGGTGGCGGGAGTTCGTCCGGCACGTCTACCG
+CCCCACCAGTGCAGGCTGCCTATCAGAAAGTGGTGGCTGGTGTGGCTAATGCCCTGGCCCACAAGTATCA
-TCGGGAGATGCCCGAGCTGGCGACGGCGAACCAGCTCGGTGCGAGCGAAG
+CTAAGCTCGCTTTCTTGCTGTCCAATTTCTATTAAAGGTTCCTTTGTTCCCTAAGTCCAACTACTAAACT
-ACCTCCCGGCGTTCTTCTGGACGGGCGAGACGGACATGGCCTGTCTGGAC
+GGGGGATATTATGAAGGGCCTTGAGCATCTGGATTCTGCCTAATAAAAAACATTTATTTTCATTGC
-GCGGCCATCGACGGCGTTCGCAAGCGGGGCTACGCACACCACATCGAGCG
-GCTCATGCTGCTCTCGAACTTCTCGCTGCTGCTCGGTGTCGAGCCCGCAC
-AGCTCAACCGCTGGTTCCACGCCGGCTACGTCGACGCCTTCCACTGGGTC
+>gi|254770623|gb|GQ272201.1| Anas flavirostris oxyptera voucher LSUMZ:B8251 hemoglobin beta A subunit (HBB) gene, complete cds
-ACGACGCCAAACGTCGTCGAGATGGGGCTGTACGGCTCTGGCGCGTTCGC
+ATGGTGCACTGGACAGCCGAGGAGAAGCAGCTCATCACCRGCCTCTGGGGCAAGGTCAATGTGGCCGACT
-CACGAAGCCCTACGCCGCCTCGGCGAACTACGTCGACAAGATGAGCGACC
+GTGGTGCTGAGGCCCTGGCCAGGTAGGTTCGGCTCCCGGGCATCGGCTCGGCTGCATCTGCATGGAGAAA
-ACTGCAGCGACTGTCAGTACTACAAGACGAAGACGACCGGAGAGCGAGCG
+CCGCTGCAGGCACAGGAGGGAGCATTAACGGGGTGTGTGTGCTTCTCCCCCCTTCTCTCTGCAGGCTGCT
-TGTCCGTTCAACACGCTGTACTGGGACTTTCTGGACCGCAACGAGTCACA
+GATCGTCTACCCCTGGACCCAGAGGTTCTTCGCCTCCTTCGGCAACCTGTCCAGCCCCACCGCCATCCTT
-GCTCCGGTCGAACCACCGGATGGGGCTCGTCTACAGCCACCTCGACGACA
+GGCAACCCCATGGTCCGYGCCCATGGCAAGAAAGTGCTCACCTCCTTCGGAGATGCCGTGAAGAACCTGG
-AGGACGACGACCAGCTGACGGCGATCCGACAGCGAGCGGACGAACTGCGG
+ACAACATCAAGAACACCTTTGCCCAGCTGTCCGAGCTGCACTGCGACAAGCTGCACGTGGACCCCGAGAA
-ACGCGAGCCGCCGACAGCGAGCTGTGA
+CTTCAGGGTGAGCCACACTCCTGGCCAGGGCACCCATCCCCATGCATCTCCATGGGGAGTTTCTCCCCAT
+GCCCCCAGGCCATGTCCCCAGTCCCACAGGTGGGGACTCCCTGTAGATATGCCAGTGCTGGAGGAAGAGA
+AGCTGGTGGTCGAGGCAAGGGGCAGAACTGGGAGGAGAGGCAGGGAAGGGACCCACATGGAGCTTGGGGA
+GAAAGGACCAAAGGGGCCGAAGGGGCCATAGGGAGGGTGAAAGCAAGGATACAAGGGGGCAGGAAAGGCG
+GTGAGGAGGTGGCTGCAGCGCGGAAAGGGAGGGGGAGCGTAAAGTGAAAGCAGTTGTTGGAGCAGGAAGA
+GGTCTGAGCTAAGGGGAAAGCAAAGGAGCAAGAGCGAAACCTGGCGTGGAGGAGAAAGGAGAGAGGAGTG
+ATGAGCAAGAGACAGTGGCTAGATGCCAACAGCCAAAGAGGAGTGGGGCATAGAGGGAGAGAGAAGTTTT
+GTTCCCGCATCTCTGCAGATGAGAGTCTCCCGGTGGGGTAGGAGACCCAGCACTTGTCACTGGGGCTGGC
+TGGGATCCCCCCATGCCAGTGGGAGCTTGCCCTTGGTGCCAGGGTGCTTTGCACGTGCCAGCTCCCTGCT
+GCTCAGCAGACGCTCAGCTCTGCCTCCTGCTCGGGAGAACTCCCAAATGAAGGCAGAAGGGAGAAAAAAT
+TTATCAACAGAATTGTTGGAGAATTTTTGGTTACTCATCCCATACCAGTAGCAAGGGGAAGAAATATGGC
+CTGGGATCAGTGGTTGAGATGAAAAGCTTTGGAGTCAGTGGCCCAGACTAAACAGGGGCTGGTGCATTTC
+GTGTGTTGTACATTTTGTGATTTAGACTGAACAAGAGGATTAATGAGTTTAAGGTACATCTTTAAAAGGG
+CTGCAGTTTGCGGGGAGATTTTTAAGCCTACAAACGCCTGTAGGTTCCCCTGGGGCTGGTGCAAGTGTTG
+GTGCGGGGATCAGCAGTCTCCCGGGCACTGTTAACCAGGGGTGCTCATGTTCCCACAGCTCCTGGGTGAC
+ATCCTCATCATCGTCCTGGCCTCCCACTTCACCAAGGATTTCACTCCTGAATGCCAGGCTGCCTGGCAGA
+AGATGGTCCGCGTGGTGGCCCACGCTCTGGCCCGCAAGTACCACTAA

Difference between revisions of "Nucleotide Sequences"

Revision as of 21:08, 31 January 2012

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