Difference between revisions of "Time of fruit ripening"

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The tomato is a model system for climateric fruit.  
 
The tomato is a model system for climateric fruit.  
  
The rate limiting step in ethylene synthesis is the conversion of S-adenosylmethionine to 1-amino-cyclopropane-1carboxylic acid (ACC) via ACS synthases. ACS genes LeACS1A, LeACS4, LeACS2 and LeACS6 are under developmental control and are responsible for the initiation of ripening ethylene. Both are induced at the onset of ripening, and this induction is impaired by mutation at the ripening-inhibitor (rin) locus (Barry et al., 2000). Fruit homozygous for the rin mutation fail to exhibit ripening associated with ethylene production. Therefore, these genes would be good genes to look into.  
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1. The rate limiting step in ethylene synthesis is the conversion of S-adenosylmethionine to 1-amino-cyclopropane-1carboxylic acid (ACC) via ACS synthases. ACS genes '''LeACS1A, LeACS4''', '''LeACS2 and LeACS6''' are under developmental control and are responsible for the initiation of ripening ethylene. Both are induced at the onset of ripening, and this induction is impaired by mutation at the ripening-inhibitor (rin) locus (Barry et al., 2000). Fruit homozygous for the rin mutation fail to exhibit ripening associated with ethylene production. Therefore, these genes would be good genes to look into.  
  
  
 
<center>[[File:Screen shot 2013-02-11 at 3.06.45 PM.png]]</center>
 
<center>[[File:Screen shot 2013-02-11 at 3.06.45 PM.png]]</center>
  
On rin locus there are family genes called the MAS box genes which regulate timing of ethylene synthesis. These same genes were found in strawberry suggesting that a conserved function of MADs box proteins in regulating ripening. LeMADS-MC, which is expressed in immature and ripe fruit and TDR4, TDR6, TAG1, TC125359/TM29, TC117868, and TC124330) are thus candidates for genes encoding MADS box proteins that may interact with LeMADS-RIN. In addition, TAG1 and SEP29 have been repressed in transgenic tomatoes.  
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2. On rin locus there are family genes called the MAS box genes which regulate timing of ethylene synthesis. These same genes were found in strawberry suggesting that a conserved function of MADs box proteins in regulating ripening. '''LeMADS-MC''', which is expressed in immature and ripe fruit and '''TDR4, TDR6, TAG1, TC125359/TM29, TC117868, and TC124330''' are thus candidates for genes encoding MADS box proteins that may interact with LeMADS-RIN. In addition, TAG1 and SEP29 have been repressed in transgenic tomatoes.  
  
 
<center>[[File:Screen shot 2013-02-11 at 3.42.02 PM.png]]</center>
 
<center>[[File:Screen shot 2013-02-11 at 3.42.02 PM.png]]</center>
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Is the most widely studied nonclimacteric ripening fruit
 
Is the most widely studied nonclimacteric ripening fruit
  
The GAST-like genes are known to play a role in fruit ripening. GAST-like gene, FaGAST1 and FaGAST2 from strawberry shows an increases in throughout fruit receptacle development and ripening. related to the fruit size during development. Both are needed to work together for fruit cell size during fruit ripening and therefore, could be candidates for search in the blueberry (Moyano-Canete et al. 2012). Accession number: GenBank GW402389.1
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1. The GAST-like genes are known to play a role in fruit ripening. GAST-like gene, '''FaGAST1''' and '''FaGAST2''' from strawberry shows an increases in throughout fruit receptacle development and ripening. related to the fruit size during development. Both are needed to work together for fruit cell size during fruit ripening and therefore, could be candidates for search in the blueberry (Moyano-Canete et al. 2012). Accession number: GenBank GW402389.1
  
  
In tomato it has been shown that SEP4-like gene is necessary for ripening in tomato and in strawberry FaMADS9 gene has been shown to control development in non-climateric fruit. FaMADs( controls ripening and development of the petal, achene, and receptacle tissues (Seymour et al. 2010). Accession number: GenBank AF484683.
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2. In tomato it has been shown that SEP4-like gene is necessary for ripening in tomato and in strawberry '''FaMADS9''' gene has been shown to control development in non-climateric fruit. FaMADs( controls ripening and development of the petal, achene, and receptacle tissues (Seymour et al. 2010). Accession number: GenBank AF484683.
  
  
A strawberry-related AAT gene, FaAAT2, involved in biosynthesis of esters that contribute to fruit flavor would a good candidate to see how different aspects of ripening occur (Cumpildo-Laso et al. 2012). Accession Number: JN089766
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3. A strawberry-related AAT gene, '''FaAAT2''', involved in biosynthesis of esters that contribute to fruit flavor would a good candidate to see how different aspects of ripening occur (Cumpildo-Laso et al. 2012). Accession Number: JN089766
  
Fahyprp gene is involved anchoring polymeric polyphenols that are regulated by auxins. Auxin is essential for the biosynthesis of ethylene and therefore, would a be a good candidate to look for in blueberry (Blanco-Portales et al. 2004).
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4. '''Fahyprp''' gene is involved anchoring polymeric polyphenols that are regulated by auxins. Auxin is essential for the biosynthesis of ethylene and therefore, would a be a good candidate to look for in blueberry (Blanco-Portales et al. 2004).
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5. Auxin produced by achenes represses ripening of fruit but is key for fruit growth. Therefore, it is speculated that ripening-enhanced genes is regulated by auxin. Below is table of genes that are co-orinated with auxin and support ripening of fruit.
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<center>[[File:Screen shot 2013-02-12 at 1.35.31 PM.png]]</center>

Revision as of 18:54, 12 February 2013

Fruit is classified on a physiological basis as climacteric (presence) or nonclimateric (absence) of increased respiration and synthesis from ethylene (Giovannoni 2004). Blueberries like strawberries and grapes are nonclimacteric fruit and capable of ripening in the absence of increased ethylene synthesis. The distinctions between climacteric and nonclimacteric are poorly understood. It is suggested that nonclimacteric phenotypes may represent mutations in ethylene synthesis, but both types have common regulatory mechanisms. Therefore, I will look at gene involved in ripening for both climateric and nonclimacteric fruit in hopes to piece together genes in blueberry involved in time of fruit ripening.

Tomato:

The tomato is a model system for climateric fruit.

1. The rate limiting step in ethylene synthesis is the conversion of S-adenosylmethionine to 1-amino-cyclopropane-1carboxylic acid (ACC) via ACS synthases. ACS genes LeACS1A, LeACS4, LeACS2 and LeACS6 are under developmental control and are responsible for the initiation of ripening ethylene. Both are induced at the onset of ripening, and this induction is impaired by mutation at the ripening-inhibitor (rin) locus (Barry et al., 2000). Fruit homozygous for the rin mutation fail to exhibit ripening associated with ethylene production. Therefore, these genes would be good genes to look into.


Screen shot 2013-02-11 at 3.06.45 PM.png

2. On rin locus there are family genes called the MAS box genes which regulate timing of ethylene synthesis. These same genes were found in strawberry suggesting that a conserved function of MADs box proteins in regulating ripening. LeMADS-MC, which is expressed in immature and ripe fruit and TDR4, TDR6, TAG1, TC125359/TM29, TC117868, and TC124330 are thus candidates for genes encoding MADS box proteins that may interact with LeMADS-RIN. In addition, TAG1 and SEP29 have been repressed in transgenic tomatoes.

Screen shot 2013-02-11 at 3.42.02 PM.png

Strawberry:

Is the most widely studied nonclimacteric ripening fruit

1. The GAST-like genes are known to play a role in fruit ripening. GAST-like gene, FaGAST1 and FaGAST2 from strawberry shows an increases in throughout fruit receptacle development and ripening. related to the fruit size during development. Both are needed to work together for fruit cell size during fruit ripening and therefore, could be candidates for search in the blueberry (Moyano-Canete et al. 2012). Accession number: GenBank GW402389.1


2. In tomato it has been shown that SEP4-like gene is necessary for ripening in tomato and in strawberry FaMADS9 gene has been shown to control development in non-climateric fruit. FaMADs( controls ripening and development of the petal, achene, and receptacle tissues (Seymour et al. 2010). Accession number: GenBank AF484683.


3. A strawberry-related AAT gene, FaAAT2, involved in biosynthesis of esters that contribute to fruit flavor would a good candidate to see how different aspects of ripening occur (Cumpildo-Laso et al. 2012). Accession Number: JN089766

4. Fahyprp gene is involved anchoring polymeric polyphenols that are regulated by auxins. Auxin is essential for the biosynthesis of ethylene and therefore, would a be a good candidate to look for in blueberry (Blanco-Portales et al. 2004).

5. Auxin produced by achenes represses ripening of fruit but is key for fruit growth. Therefore, it is speculated that ripening-enhanced genes is regulated by auxin. Below is table of genes that are co-orinated with auxin and support ripening of fruit.

Screen shot 2013-02-12 at 1.35.31 PM.png