Difference between revisions of "Group 1 intestines"
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Line 1: | Line 1: | ||
Hello | Hello | ||
+ | |||
+ | [[Important Files]] | ||
[[Dylan Maghini]] | [[Dylan Maghini]] | ||
Line 14: | Line 16: | ||
*Approach II- tweak | *Approach II- tweak | ||
*Unknown proteins -- not gonna happen | *Unknown proteins -- not gonna happen | ||
− | *Other GAFs -- also not gonna happen | + | *Other GAFs -- also probably not gonna happen |
*missed homo sapiens | *missed homo sapiens | ||
+ | |||
+ | Current status: | ||
+ | *Cytoscape representation of Gene Ontology, can filter to find groups of GO terms, see how terms are related, etc. Filter based off of scores that we've given them. | ||
+ | *Approach 1: Have looked at most up-regulated and down-regulated genes, and their functions. | ||
+ | |||
Analysis Modules: | Analysis Modules: | ||
[http://www.bioinformatics.babraham.ac.uk/projects/fastqc/Help/3%20Analysis%20Modules/] | [http://www.bioinformatics.babraham.ac.uk/projects/fastqc/Help/3%20Analysis%20Modules/] |
Latest revision as of 14:23, 4 May 2016
Hello
Housekeeping genes for intestines
To do list:
- Approach I
- Approach II- tweak
- Unknown proteins -- not gonna happen
- Other GAFs -- also probably not gonna happen
- missed homo sapiens
Current status:
- Cytoscape representation of Gene Ontology, can filter to find groups of GO terms, see how terms are related, etc. Filter based off of scores that we've given them.
- Approach 1: Have looked at most up-regulated and down-regulated genes, and their functions.
Analysis Modules:
[1]