Difference between revisions of "Test Mnt/Tet promoter"

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Line 12: Line 12:
 
add aTc
 
add aTc
  
pBAD→RBS+TetR+TT+pMnt/Tet→GFP glows
+
pBAD→RBS+TetR+TT+pMnt/Tet→RBS+GFP glows
  
 
I13453+[http://partsregistry.org/Part:BBa_B0034 B0034]+[http://partsregistry.org/Part:BBa_C0040 C0040]+B0015+K091105+E0240
 
I13453+[http://partsregistry.org/Part:BBa_B0034 B0034]+[http://partsregistry.org/Part:BBa_C0040 C0040]+B0015+K091105+E0240
Line 19: Line 19:
 
'''2) Test Mnt repression:'''
 
'''2) Test Mnt repression:'''
  
pBAD→RBS+Mnt+TT+pMnt/Tet→GFP glows
+
pBAD→RBS+Mnt+TT+pMnt/Tet→RBS+GFP glows
  
I13453+B0034+[http://partsregistry.org/Part:BBa_C0072 C0072]+B0015+K091105+E0240
+
I13453+[http://partsregistry.org/Part:BBa_I13025 I13025]+B0015+K091105+E0240
  
  
 
'''3) Test Tet and Mnt repression:'''
 
'''3) Test Tet and Mnt repression:'''
  
pBAD→RBS+TetR+RBS+Mnt+TT+pMnt/Tet→GFP does not glows
+
pBAD→RBS+TetR+RBS+Mnt+TT+pMnt/Tet→RBS+GFP does not glows
  
 
I13453+B0034+C0040+B0034+C0072+B0015+K091105+E0240
 
I13453+B0034+C0040+B0034+C0072+B0015+K091105+E0240
Line 37: Line 37:
 
K091105 ligated with E0240
 
K091105 ligated with E0240
  
need to ligate some promoter (digest with E and S) with an RBS (digest E and X) and ligate TetR(digest with E and S) with a double terminator (digest with E and x)
+
need to ligate pBAD to and RBS  
  
then ligate the promoter+RBS to the 5' end of the TetR+TT parts together
+
then ligate TetR to the 3' end of that
 +
 
 +
then ligate TT to the 3' end of that
  
 
then ligate that part 5' to the pMnt/Tet+GFP
 
then ligate that part 5' to the pMnt/Tet+GFP
Line 47: Line 49:
  
  
ligate Mnt to the double terminator
+
ligate the part RBS+Mnt to the 5' end of the TT
  
the ligate the promoter+RBS from the first test sequence to the 5' end of the Mnt+TT
+
then ligate pBAD to the 5' end of that
  
ligate this to the 5' end of the pMnt/Tet+GFP
+
then ligate the part pMnt/Tet+RBS+GFP to the 3' end of that
  
 
This makes the second promoter test sequence.
 
This makes the second promoter test sequence.
Line 57: Line 59:
  
  
 +
ligate the part RBS+Mnt+TT to the 3' end of pBAD+RBS+TetR
  
 
+
then ligate the part pMnt/Tet+RBS+GFP to the 3' end of that
ligate the Mnt+TT from the second test sequence to the 3' end of the TetR coding region
 
 
 
then ligate the promoter+RBS from the first test sequence to the 5' end of that
 
 
 
next ligate the pMnt/Tet to the 3' end of that entire sequence
 
  
 
This makes the third promoter test sequence
 
This makes the third promoter test sequence

Revision as of 19:49, 2 July 2008

Test Mnt/Tet promoter

The pMnt/TetR promoter is constitutively on and is repressed by the TetR protein. The addition of aTc should repress the TetR causing it to glow. The addition of the Mnt protein should also repress the promoter, causing it to not glow.


1) Test tet repression:

pBAD→RBS+TetR+t+t+pMnt/Tet→RBS+GFP does not glows

I13453+S0101+B0015+K091105+E0240

add aTc

pBAD→RBS+TetR+TT+pMnt/Tet→RBS+GFP glows

I13453+B0034+C0040+B0015+K091105+E0240


2) Test Mnt repression:

pBAD→RBS+Mnt+TT+pMnt/Tet→RBS+GFP glows

I13453+I13025+B0015+K091105+E0240


3) Test Tet and Mnt repression:

pBAD→RBS+TetR+RBS+Mnt+TT+pMnt/Tet→RBS+GFP does not glows

I13453+B0034+C0040+B0034+C0072+B0015+K091105+E0240

add aTc does not glow


Ligation plan for three test sequences

K091105 ligated with E0240

need to ligate pBAD to and RBS

then ligate TetR to the 3' end of that

then ligate TT to the 3' end of that

then ligate that part 5' to the pMnt/Tet+GFP

This will make the first promoter test sequence.


ligate the part RBS+Mnt to the 5' end of the TT

then ligate pBAD to the 5' end of that

then ligate the part pMnt/Tet+RBS+GFP to the 3' end of that

This makes the second promoter test sequence.


ligate the part RBS+Mnt+TT to the 3' end of pBAD+RBS+TetR

then ligate the part pMnt/Tet+RBS+GFP to the 3' end of that

This makes the third promoter test sequence


the first and third test sequences will also need to be tested by adding aTc

the first test sequence should glow and the third should not.