Difference between revisions of "Citrate Synthase"

Revision as of 02:25, 1 October 2009

I did a blastp search using our species' citrate synthase protein sequence.

The following halophiles were the tops hits and are accompanied by their basltp results:

Haloarcula marismortui citrate synthase protein sequence:

        1 msddlkkgle gvivaesels vidgdagklv yrgytiedla kgasyeevly llwhghlpnr
      61 delsefkqam vdargvdddv istvrqlaea denpmaalrt avsmlsafdp apedaeptde
     121 mvnletgrri takiptiiaa ftrirdgkep vephddldha anflymlnge epddvladvf
     181 dqalvlhadh glnastfsai ttastlsdvh savtsaigtl kgplhgganq dvmemlkevd
     241 daesdpldwv knaldegrrv sgfghrvynv kdprakilge rskelgeaag tlkwyemstt
     301 iedylmeekg lapnvdfysa styyqmgipi diytpifams rvggwvahvf eyiednrlir
     361 praryvgknt detefvplde r

Natronomonas pharaonis citrate synthase protein sequence:

       1 msdelkkgle gvlvaessls yidgdegklv yrgytiddla rnasfeevvy llwhgelpta
      61 delgsfkssm aeerhlddgv qqlvrelaea deepmaalrs ivsslsaydp dadaeptdea
     121 anlrkgrrit akiptalaaf sriregddpv epredldhaa nflymlngee pdevladtfd
     181 malvlhadhg lnastfsamv tsstladlha aitsavgals gslhgganqd vmeallelde
     241 sgkepvewve drldagervp gfghrvynvk dprakilsee sealgeaagt pqwhnystei
     301 eeylteekgl apnvdfysas tyyqmgipvd iytpifamsr vggwiahvle qyddnrlirp
     361 rgryvgpddr tvtpider

Halogeometricum borinquense citrate synthase protein sequence

       1 msddlkrgle gvlvaesels yidgdagqlv yrghtiedla rnasyeevvy llwhgelptr
      61 eqldefstam aeerelddav ldeiralaaa devpmaalrt ivsslsaydd dadhedvtdl
     121 ktnikkgcri takiptalaa fnrlrngedv vhprtdlsha anflymlnge epddvlaetf
     181 dmalvlhadh glnastfsam vtastlsdlh savtsaigtl agslhggana nvmrmlkeid
     241 esdkdptqwv edalesgrrv pgfghrvynv kdprakilge ksealgeaag dmkwydysva
     301 iedyigeekg lapnvdfysa styyqmgipv diytpifams rvggwiahvi eqfednrlir
     361 praryvgred qtftpider

Haloferax volcanii citrate synthase protein sequence

       1 msgelkrgle gvlvaeskls fidgdagqlv ycgydiedla rdasyeevly llwhgalptg
      61 eeldafsdel aahrdlddgv ldvarelaeq despmaalrt lvsamsayde sadfedvtdr
     121 evnlekakri takmpsvlaa yarfrrgddy vepdeslnha anflymlnge epnevlaetf
     181 dmalvlhadh glnastfsam vtsstlsdly savtsaigtl sgslhggana nvmrmlkdvd
     241 dsdmdptewv kdaldrgerv agfvhrvynv kdprakilga ksealgeaag dmkwyemsva
     301 ieeyigeekg lapnvdfysa styyqmgipi dlytpifavs raggwiahvl eqyednrlir
     361 prarytgekd ldftpvder

Haloquadratum walsbyi citrate synthase protein sequence

       1 msdevkrgle dvlvaesels cidgdagelv yrgysiedla qkasyeevvy llwhgrlptg
      61 delqsftdam ieertintgv yeqierlaaa despmaalrt ivstlsaydp dadaevidhe
     121 anarkarria aklptalaal qrcregndpv tprsdldhaa nflymlngse pdpvlaetfd
     181 malvlhadhg lnastfsakv tastlsdlhc aittavgtls gslhgganan vmrmlkevha
     241 sdadavtwie dalesgrrvp gfghrvynvk dprarilger skelaeaage mcwynysiti
     301 eeyiddhkgl apnvdfysas tyyqmgipid iytpifamar tagwiahtfe qydenrlirp
     361 raryvgneda tfksvekr

Halobacterium salinarum citrate synthase protein sequence:

       1 msdelkkgle dvlvaesdls fidgdagklv ycgyaiedla rtasyeevly llwhgdlptr
      61 seldafradm ashreidddv lalvenlaaa dadpmaalrt aasalsahdd taggsdpdda
     121 resgkritak lptivaaftr lrngddvvap rddlghaanf lymlngeapd dvladvfdqa
     181 lvlhadhgln astfsgmvta stladvhaav tsaigtlsgs lhggananvm rmlkevddsd
     241 kdplswvqda langervmgf ghrvynvkdp rahilserse elgaaagdtk wyemsvaied
     301 ymadekglap nvdfysasty yqmgipvdiy tpifamsrvg gwvghvleqy ddnrlirpra
     361 ryvgaedrds tplder

The following prokaryotes were the top hits among their domain