Difference between revisions of "Cation pumps"

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[[Image:Picture 19.png]]
 
[[Image:Picture 19.png]]
  
−
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032494 NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5) (IMGterm) 644032494]
+
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032494 NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5) (IMGterm) 644032494]<br>
 +
A BLAST using megablast produced the following results:<br>
 +
[[Image:Picture 20.png]]<br>
 +
[[Image:Picture 22.png]]<br>
 +
[[Image:Picture 21.png]]<br>
 +
A BLAST using blastn produced the following results:<br>
 +
[[Image:Picture 24.png]]
  
−
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032648 ABC-type Mn2+/Zn2+ transport system, permease component 644032648]
+
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032648 ABC-type Mn2+/Zn2+ transport system, permease component 644032648]<br>
 +
A BLAST using megablast produced no results other than our own species.<br>
 +
A BLAST using blast n produced the following results:<br>
 +
[Image:Picture 27.png]<br>
  
−
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032689 K+ transport system, NAD-binding component 644032689]
+
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032689 K+ transport system, NAD-binding component 644032689]<br>
 +
A BLAST using megablast produced the following results:<br>
 +
[[Image:Picture 28.png]]<br>
 +
[[Image:Picture 29.png]]<br>
 +
Trk active potassium channel<br>
 +
Potassium channel protein<br>
 +
A BLAST using blastn produced the following results:<br>
 +
[[Image:Picture 30.png]]<br>
  
−
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032725 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit ( EC:1.6.5.3 ) 644032725]
+
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032725 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit ( EC:1.6.5.3 ) 644032725]<br>
 +
A BLAST using megablast produced no results other than our own species.<br>
 +
A BLAST using blastn produced the following results:<br>
 +
[[Image:Pic3.png]]<br>
 +
[[Image:Pic1.png]]<br>
 +
[[Image:Pic2.png]]<br>
  
−
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032853predicted regulatory ligand binding protein similar to C-terminal domain of K+ channels 644032853]
+
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032854Kef-type K+ transport system, membrane component 644032854]<br>
 +
A BLAST using megablast produced no results other than our own species.<br>
 +
A BLAST using blastn produced the following results:<br>
 +
[[Image:Pic4.png]]<br>
 +
[[Image:Pic5.png]]<br>
  
−
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032854Kef-type K+ transport system, membrane component 644032854]
+
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032916 NhaP-type Na+(K+)/H+ antiporter 644032916]<br>
 +
A BLAST using megablast produced the following results:<br>
 +
[[Image:Pic6.png]]<br>
 +
[[Image:Pic7.png]]<br>
 +
A BLAST using blastn produced the following results:<br>
 +
[[Image:Pic8.png]]<br>
 +
[[Image:Pic9.png]]<br>
  
−
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032916 NhaP-type Na+(K+)/H+ antiporter 644032916]
+
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032920 AAA+ family ATPase 644032920]<br>
 +
A BLAST using megablast produced the following results:<br>
 +
[[Image:Pic10.png]]<br>
 +
[[Image:Pic11.png]]<br>
 +
A BLAST using blastn produced the following results:<br>
 +
[[Image:Pic12.png]]<br>
 +
[[Image:Pic13.png]]<br>
  
−
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644032920 AAA+ family ATPase 644032920]
+
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644033032 ABC-type Fe3+ transport system, periplasmic component 644033032]<br>
 +
A BLAST using megablast produced no results other than our own species.<br>
 +
A BLAST using blastn produced the following results:<br>
 +
[[Image:Pic14.png]]<br>
 +
[[Image:Pic15.png]]<br>
  
−
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644033032 ABC-type Fe3+ transport system, periplasmic component 644033032]
+
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644033110 ABC-type Mn2+/Zn2+ transport system, permease component 644033110]<br>
 +
A BLAST using megablast produced the following results:<br>
 +
[[Image:Pic16.png]]<br>
 +
[[Image:Pic17.png]]<br>
 +
A BLAST using blastn produced the following results:<br>
 +
[[Image:Pic18.png]]<br>
 +
[[Image:Pic19.png]]<br>
  
−
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644033110 ABC-type Mn2+/Zn2+ transport system, permease component 644033110]
+
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644033168 AAA+ family ATPase 644033168]<br>
−
 
+
A BLAST using megablast produced no results other than our own species.<br>
−
[http://img.jgi.doe.gov/cgi-bin/geba/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=644033168 AAA+ family ATPase 644033168]
+
A BLAST using blastn produced the following results:<br>
 +
[[Image:Pic20.png]]<br>
 +
[[Image:Pic21.png]]<br>
 +
[[Image:Pic22.png]]<br>
 +
[[Image:Pic23.png]]<br>

Latest revision as of 02:49, 1 October 2009

The following is a list of the cation pumps and cation-influenced structures encoded in our organism's genome:

Na+/proline symporter 644032116
A BLAST (megablast) of the gene encoding this ion pump produced the following results:
Picture 5.png

Kef-type K+ ransport system, predicted NAD-binding component 644032129
A BLAST using megablast produced no results other than our own species.
A BLAST (blastn) of the gene encoding this ion pump produced the following results:
Picture 6.png

Ca2+/Na+ antiporter 644032240
A BLAST using megablast produced no results other than our own species.
A BLAST using blastn produced the following results:
Picture 7.png

Mn2+/Fe2_ transporter, NRAMP family 644032307
A BLAST using megablast produced the following results:
Picture 8.png

H(+)-transporting ATP synthase, vacuolar type, subunit D ( EC:3.6.3.14 ) 644032373
A BLAST using megablast produced the following results:
Picture 10.png
A BLAST using blastn produced the following results:
Picture 11.png

archaeal/vacuolar-type H+-ATPase subunit B ( EC:3.6.3.14 ) 644032378
A BLAST using megablast produced the following results:
Picture 12.png
A BLAST using blastn produced the following results:
Picture 13.png

archaeal/vacuolar-type H+-ATPase subunit F ( EC:3.6.3.14 ) 644032380
A BLAST using megablast produced no results other than our own species.
A BLAST using blastn produced the following results:
Picture 14.png

archaeal/vacuolar-type H+-ATPase subunit E ( EC:3.6.3.14 ) 644032382
A BLAST using megablast produced no results other than our own species.
A BLAST using blastn produced the following results:
Picture 15.png

archaeal/vacuolar-type H+-ATPase subunit I ( EC:3.6.3.14 ) 644032384
A BLAST using megablast produced the following results:
Picture 16.png
A BLAST using blastn produced the following results:
Picture 17.png

K+ transport system, NAD-binding component 644032472
A BLAST using megablast produced no results other than our own species.
A BLAST using blast n produced the following results:
Picture 18.png

NAD+ synthetase ( EC:6.3.5.1 ) 644032488
A BLAST using megablast produced no results other than our own species.
A BLAST using blastn produced the following results:
Picture 19.png

NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5) (IMGterm) 644032494
A BLAST using megablast produced the following results:
Picture 20.png
Picture 22.png
Picture 21.png
A BLAST using blastn produced the following results:
Picture 24.png

ABC-type Mn2+/Zn2+ transport system, permease component 644032648
A BLAST using megablast produced no results other than our own species.
A BLAST using blast n produced the following results:
[Image:Picture 27.png]

K+ transport system, NAD-binding component 644032689
A BLAST using megablast produced the following results:
Picture 28.png
Picture 29.png
Trk active potassium channel
Potassium channel protein
A BLAST using blastn produced the following results:
Picture 30.png

NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit ( EC:1.6.5.3 ) 644032725
A BLAST using megablast produced no results other than our own species.
A BLAST using blastn produced the following results:
Pic3.png
Pic1.png
Pic2.png

K+ transport system, membrane component 644032854
A BLAST using megablast produced no results other than our own species.
A BLAST using blastn produced the following results:
Pic4.png
Pic5.png

NhaP-type Na+(K+)/H+ antiporter 644032916
A BLAST using megablast produced the following results:
Pic6.png
Pic7.png
A BLAST using blastn produced the following results:
Pic8.png
Pic9.png

AAA+ family ATPase 644032920
A BLAST using megablast produced the following results:
Pic10.png
Pic11.png
A BLAST using blastn produced the following results:
Pic12.png
Pic13.png

ABC-type Fe3+ transport system, periplasmic component 644033032
A BLAST using megablast produced no results other than our own species.
A BLAST using blastn produced the following results:
Pic14.png
Pic15.png

ABC-type Mn2+/Zn2+ transport system, permease component 644033110
A BLAST using megablast produced the following results:
Pic16.png
Pic17.png
A BLAST using blastn produced the following results:
Pic18.png
Pic19.png

AAA+ family ATPase 644033168
A BLAST using megablast produced no results other than our own species.
A BLAST using blastn produced the following results:
Pic20.png
Pic21.png
Pic22.png
Pic23.png

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