Difference between revisions of "Burkholderia phage Virus Hit from Spacer 14 in Crispr One: Blast Alignment to Other Halophiles"
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'''Blasted against other halophiles''' to determine if other halophiles have segments of this viral genome in its spacers and genome in general. . . | '''Blasted against other halophiles''' to determine if other halophiles have segments of this viral genome in its spacers and genome in general. . . | ||
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| + | '''Halorhabdus utahensis:''' Accession number determined from NCBI: NC_013158.1 | ||
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| + | ---- | ||
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| + | '''Halobacterium salinarium R1:''' Accession number determined from NCBI: NC_010364 | ||
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| + | ---- | ||
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| + | Haloarula californiae= CANNOT FIND ACCESSION NUMBER!!!!!!!!! | ||
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| + | Haloferax volcanii= CANNOT FIND ACCESSION NUMBER for whole genome!!!!!!! | ||
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| + | Haloferax mediterranei | ||
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| + | Haloarcula sinaiiensis | ||
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| + | Haloarcula vallismortis | ||
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| + | Haloarcula marismortui | ||
Revision as of 03:46, 14 November 2009
Accession Number of this Virus= EU307292.1
What species does this virus infect? Blastn against nr/nt database. . .
WHY DOESNT OUR SPECIES SHOW UP?????????????
Lots of bacteria and other bacteriophages it infects
The bacterial species it infects were similar to the bacterial species that came up with hits in the our species spacer blast results, but those similarities were in genes. . .
Blasted against other halophiles to determine if other halophiles have segments of this viral genome in its spacers and genome in general. . .
Halorhabdus utahensis: Accession number determined from NCBI: NC_013158.1
Halobacterium salinarium R1: Accession number determined from NCBI: NC_010364
Haloarula californiae= CANNOT FIND ACCESSION NUMBER!!!!!!!!!
Haloferax volcanii= CANNOT FIND ACCESSION NUMBER for whole genome!!!!!!!
Haloferax mediterranei
Haloarcula sinaiiensis
Haloarcula vallismortis
Haloarcula marismortui
