Difference between revisions of "TRNA Genes Check List 2009"
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Blastn results in the nr/nt database showed the following matches: | Blastn results in the nr/nt database showed the following matches: | ||
[http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=Retrieve&db=nucleotide&dopt=GenBank&RID=9RZFNDE6014&log%24=nucltop&blast_rank=6&list_uids=174713 Halobacterium volcanii Gly-tRNA-1A] | [http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=Retrieve&db=nucleotide&dopt=GenBank&RID=9RZFNDE6014&log%24=nucltop&blast_rank=6&list_uids=174713 Halobacterium volcanii Gly-tRNA-1A] | ||
| + | Score = 69.8 bits (76) | ||
E-value: 1e-09 | E-value: 1e-09 | ||
Query Coverage: 100% | Query Coverage: 100% | ||
| − | + | Identities = 58/71 (81%) | |
| − | + | Gaps = 0/71 (0%) | |
| + | Strand=Plus/Plus | ||
| + | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=Retrieve&db=nucleotide&dopt=GenBank&RID=9RZFNDE6014&log%24=nucltop&blast_rank=7&list_uids=43445 Halobacterium cutirubrum transfer RNA-Gly (GCC)] | [http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=Retrieve&db=nucleotide&dopt=GenBank&RID=9RZFNDE6014&log%24=nucltop&blast_rank=7&list_uids=43445 Halobacterium cutirubrum transfer RNA-Gly (GCC)] | ||
E-value: 1e-09 | E-value: 1e-09 | ||
Query Coverage: 100% | Query Coverage: 100% | ||
Max Identity: 81% | Max Identity: 81% | ||
Revision as of 16:53, 31 August 2009
tRNA 644031717: tRNA-Val
Megablast results in the nr/nt database showed a match with the following statistics:
Halobacterium cutirubrum transfer RNA-Val (GAC)
E-value: 2e-18
Query Coverage: 100%
Max Identity: 90%
tRNA 644031821: tRNA-Gly
Blastn results in the nr/nt database showed the following matches: Halobacterium volcanii Gly-tRNA-1A Score = 69.8 bits (76) E-value: 1e-09 Query Coverage: 100% Identities = 58/71 (81%) Gaps = 0/71 (0%) Strand=Plus/Plus Halobacterium cutirubrum transfer RNA-Gly (GCC) E-value: 1e-09 Query Coverage: 100% Max Identity: 81%
