Difference between revisions of "TRNA Genes Check List 2009"

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     Gaps = 0/71 (0%)
 
     Gaps = 0/71 (0%)
 
     Strand=Plus/Plus
 
     Strand=Plus/Plus
 +
 +
'''tRNA 644031874: tRNA-Val'''
 +
    [http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=Retrieve&db=nucleotide&dopt=GenBank&RID=9S07YKWK01S&log%24=nucltop&blast_rank=4&list_uids=174745 Halobacterium volcanii Val-tRNA-1]

Revision as of 16:58, 31 August 2009

tRNA 644031717: tRNA-Val

  Megablast results in the nr/nt database showed a match with the following statistics:
    Halobacterium cutirubrum transfer RNA-Val (GAC)    
    S = 99.0 bits (53)
    E-value = 2e-18
    Query Coverage: 100%
    Identities = 69/76 (90%)
    Gaps = 3/76 (3%)
    Strand=Plus/Plus

tRNA 644031821: tRNA-Gly

 Blastn results in the nr/nt database showed the following matches:
   Halobacterium volcanii Gly-tRNA-1A
    S = 69.8 bits (76) 
    E-value = 1e-09
    Query Coverage: 100%
    Identities = 58/71 (81%)
    Gaps = 0/71 (0%)
    Strand=Plus/Plus
    
   Halobacterium cutirubrum transfer RNA-Gly (GCC)   
    S = 69.8 bits (76)
    E-value = 1e-09
    Query Coverage: 100%
    Identities = 58/71 (81%)
    Gaps = 0/71 (0%)
    Strand=Plus/Plus

tRNA 644031874: tRNA-Val

   Halobacterium volcanii Val-tRNA-1