Difference between revisions of "Shine Dalgarno Sequence Logo"
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TCAAAGCACCCGAGTGGGGTCCGGATGAGGCCGTCATGCGACGGTCAAAT<br> | TCAAAGCACCCGAGTGGGGTCCGGATGAGGCCGTCATGCGACGGTCAAAT<br> | ||
CTGGGCTCCGCAAGGGGGCTTAAGTCGTAACAAGGTAGCCGTAGGGGAAT<br> | CTGGGCTCCGCAAGGGGGCTTAAGTCGTAACAAGGTAGCCGTAGGGGAAT<br> | ||
| − | CTGCGGCTGGAT'''CACCTCC'''TAACGATCGG | + | CTGCGGCTGGAT<font color="red">'''CACCTCC'''</font>TAACGATCGG |
Shina Dalgarno Sequence logo generated by comparing 25bp upstream of 270 <font color="red">'''JGI'''</font> annotated genes | Shina Dalgarno Sequence logo generated by comparing 25bp upstream of 270 <font color="red">'''JGI'''</font> annotated genes | ||
Latest revision as of 11:37, 9 December 2008
>2500590728 HutaDRAFT_30940 16s rRNA 2397347..2398825(+) [Halorhabdus utahensis AX-2, DSM 12940]
TCCGGTTGATCCTGCCGGAGGCCATTGCTATCGGAGTCCGATTTAGCCAT
GCTAGTCGCACGGGTTTAGACCCGTGGCAAATAGCTCAGTAACACGTGGC
CAAACTACCCTGTGGACGGAAATAACCTCGGGAAACTGAGGCTAATGTCC
GATACGACTCGCCAGCTGGAGTGCGGCGAGTCGGAAACGTTGCGGCGCCA
CAGGATGTGGCTGCGGCCGATTAGGTAGACGGTGGGGTAACGGCCCACCG
TGCCCATAATCGGTACAGGTCATGAGAGTGAGAGCCTGGAGACGGTATCT
GAGACAAGATGCCGGGCCCTACGGGGCGCAGCAGGCGCGAAACCTTTACA
CTGCACGACAGTGCGATAGGGGGACTCCGAGTGCGAGGGCATATAGTCCT
CGCTTTTGTGTACCGTAAGGTGGTACAGGAATAAGGGCTGGGCAAGACCG
GTGCCAGCCGCCGCGGTAATACCGGCAGCCCGAGTGATGGCCGCTATTAT
TGGGCCTAAAGCGTCCGTAGCCGGCCAGACAAGTCTGTTGGGAAATCCAC
GCGCTCAACGCGTGGACGTCCGGCGGAAACTGTCTGGCTTGGGGCCGGAA
GATCTGAGGGGTACGTCCGGGGTAGGAGTGAAATCCCGTAATCCTGGACG
GACCGCCGGTGGCGAAAGCGCCTCAGAAAGACGGACCCGACGGTGAGGGA
CGAAAGCTAGGGTCTCGAACCGGATTAGATACCCGGGTAGTCCTAGCTGT
AAACGATGCTCGCTAGGTGTGCCGCAGGCTACGAGCCTGCGCTGTGCCGT
AGGGAAGCCGTGAAGCGAGCCGCCTGGGAAGTACGTCTGCAAGGATGAAA
CTTAAAGGAATTGGCGGGGGAGCACTACAACCGGAGGAGCCTGCGGTTTA
ATTGGACTCAACGCCGGACATCTCACCAGCACCGACAATGTGCAGTGAAG
GTCAGGTTGATGACCTTACTGGAGCCATTGAGAGGAGGTGCATGGCCGCC
GTCAGCTCGTACCGTGAGGCGTCCTGTTAAGTCAGGCAACGAGCGAGACC
CGCACTCTTAGTTGCCAGCAGCATCTTGCGATGGCTGGGTACACTAGGAG
GACTGCCGCTGCCAAAGCGGAGGAAGGAACGGGCAACGGTAGGTCAGTAT
GCCCCGAATGTGCTGGGCGACACGCGGGCTACAATGGCCGGGACAGTGGG
ACGCCAGTCCGAGAGGACGCGCTAATCCCCGAAACCCGGTCGTAGTTCGG
ATTGAGGGCTGAAACCCGCCCTCATGAAGCTGGATTCGGTAGTAATCGCG
TGTCAGAAGCGCGCGGTGAATCCGTCCCTGCTCCTTGCACACACCGCCCG
TCAAAGCACCCGAGTGGGGTCCGGATGAGGCCGTCATGCGACGGTCAAAT
CTGGGCTCCGCAAGGGGGCTTAAGTCGTAACAAGGTAGCCGTAGGGGAAT
CTGCGGCTGGATCACCTCCTAACGATCGG
Shina Dalgarno Sequence logo generated by comparing 25bp upstream of 270 JGI annotated genes
Shina Dalgarno Sequence logo generated by comparing 25bp upstream of 284 Manatee annotated genes
Shina Dalgarno Sequence logo generated by comparing 25bp upstream of 238 Rast annotated genes
