Blasting Spacers for Our Genome

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Revision as of 17:16, 5 November 2009 by Karicheson (talk | contribs) (Blasting Spacers)
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Blasting Spacers

CRISPR one results from CRISPR finder are shown below. I blasted all of the spacers using the nr/nt database and the results are shown below.

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Spacer One: TGCGTCGTCCGGTGGCCGTCAATAAATGTCGCAAGGG

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Matches by chance!

Spacer Two: TCCTACGACCTCGTCGGCGTCAACGGCTGGCCCGA

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Spacer Three: CACCCTACAACAGGTGAAATCTACCAGACAAAAGA

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Spacer Four: TCACCCAAGCGCAAGCAACAGCTGATCGAGGACCTG

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Spacer Five: GCGACGGCGGCCAGTTCCGCGAGGGCGGGAAGGTCC

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This image is only part of it. . .

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NOTE: lots of hits from each organism- indicates that multiple parts have been incorporated into our species' spacers. . . interesting to study what genes have been inserted

Spacer Six: TGCGAGTGTTGCGGGGAACCGACTCGGGTAGGCCAG

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