Difference between revisions of "Emilie Uffman"
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Comparison of maternal trisomy and disomy (CB131,126,117,125,122,121) with Paternal trisomy and disomy (CB091,089,087,093,100,103) | Comparison of maternal trisomy and disomy (CB131,126,117,125,122,121) with Paternal trisomy and disomy (CB091,089,087,093,100,103) | ||
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-the limited variation in paternal disomy and trisomy is conserved | -the limited variation in paternal disomy and trisomy is conserved | ||
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-maternal still has variation | -maternal still has variation | ||
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-there is no clear divide between gender along PC1--what does this mean? | -there is no clear divide between gender along PC1--what does this mean? | ||
Revision as of 17:44, 7 February 2017
Comparison of maternal trisomy and disomy (CB131,126,117,125,122,121) with Paternal trisomy and disomy (CB091,089,087,093,100,103)
-the limited variation in paternal disomy and trisomy is conserved
-maternal still has variation
-there is no clear divide between gender along PC1--what does this mean?
Sorting of paternal trisomy data(Emilie) and maternal trisomy data (Jon):
Use galaxy sort tool to sort p-value in ascending order
Why is it that for many of the data there is a base mean and all statistics but no p-value?
ENSMUST00000000674.12 Base mean: 8.06384358972545 LogFC: 0.0460016853044759 Std Error: 0.0883691926491015 Wald-Stats: 0.520562471212569 P-value: NA P-adjusted: N
- See Jon's notes for information on question**
Filtered data on galaxy to remove data with 'NA' -skip 0 header line-
Copied data to excel and use shortcut to removal decimals without rounding
Copy (100lines of) data into MGI Database
Only retained 70.41% of data when filtering to remove 'NA'
Excel tools: Truncate numbers in excel: =left (A1, 18)
