JP Jan 28 16
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Revision as of 18:50, 28 January 2016 by Jupreziosi (talk | contribs)
72 nucleotide reads. What gene do they go to? How many of each are there?
How to count number of genes and compare across time points? Normalize to a housekeeping gene. OR standard procedure (look up).
- "How to normalize gene expression given you don't get the same number of reads in each sample"
How to know we have the right tissue?
- Blast overrepresented sequences of trimmed intestinal sequences.
Have asked for a list of the genes expressed in each organ from the previous paper. (Todd?)
- How can we use the data repository, can we query? SRP051827
- Two teams to work in pairs to figure out a way to take the text file and add a number to "protein of unknown function" / see if other genes are named more than once.