Difference between revisions of "Ky Roland"
From GcatWiki
| Line 16: | Line 16: | ||
*Mutant will be in numerator, and WT will be int he denominator; a number > 1 will mean that there is an overexertion in the wild type. | *Mutant will be in numerator, and WT will be int he denominator; a number > 1 will mean that there is an overexertion in the wild type. | ||
*We should not expect differential expression because the papers showed no significant differential mRNA expression between the mutant and wild type. | *We should not expect differential expression because the papers showed no significant differential mRNA expression between the mutant and wild type. | ||
| + | |||
| + | |||
| + | '''Significant Genes:''' <br> | ||
| + | *'''Sphk2'''- [http://www.genecards.org/cgi-bin/carddisp.pl?gene=Sphk2] | ||
Revision as of 15:09, 8 February 2018
- 25 and 24 = paired reads, Male mouse 2078, C201R
23 and 22 = paired reads, Female mouse 2077, WT
21 and 20 = paired reads, Male mouse 2076, WT
19 and 18 = paired reads, Male mouse 2075, WT
17 and 16 = paired reads, Male mouse 2074, WT
- 15 and 14 = paired reads, Male mouse 2073, C201R
- 13 and 12 = paired reads, Female mouse 2072, C201R
- 11 and 10 = paired reads, Female mouse 2071, C201R
- 9 and 8 = paired reads, Female mouse 2070, C201R
7 and 6 = paired reads, Female mouse 2081, WT
5 and 4 = paired reads, Female mouse 2080, WT
- 3 and 2 = paired reads, Male mouse 2079, C201R
DESeq2- Comparison of WT vs. Mutant Females: Named-Types
- Mutant will be in numerator, and WT will be int he denominator; a number > 1 will mean that there is an overexertion in the wild type.
- We should not expect differential expression because the papers showed no significant differential mRNA expression between the mutant and wild type.
Significant Genes:
- Sphk2- [1]
