Modeling Promoter Activity

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Modeling Promoter Activity

In order to use synthetic promoters to their fullest potential, we have to understand how they work. Sythetic promoters cannot help us model gene circuit activity unless models are developed for the activity of the promoter itself. Determining how exactly a promoter's strength correlates to its mutations is not easy, since for the most part it requires working with promoters on the level of individual sets of nucleiotides.

Jensen and Hammer (1997): Spacer Sequences

Jensen, Alper, Fischer, and Stephanopoulis (2006): Statistical Modeling and Critical Mutation Sites

De Mey, Maertens, Lequeux, Soetart, and Vandamme (2007): Probability and Partial Least Squares Modeling