View source for Archaeal BJ1 Virus Hit from Spacer One in Crispr One: Blast Alignments to Other Halophiles

What does this virus primarily attack? (Blasted the virus against nr/nt database)

[[Image:avbj1.jpg]]

Infects other halophiles, other bacteria and even other viruses


Blastn Alignment: Query= viral (Accession Number: AM419438.1) and Subject=species of choice

'''Halorhabdus utahensis:'''  Accession number determined from NCBI: NC_013158.1

Lots of hits, the ones shown below have e-values less than 0.005, the next e-value not included is 0.018

[[Image:HU1.jpg]]

[[Image:HU2.jpg]]

[[Image:HU3.jpg]]

[[Image:HU4.jpg]]

Check to see if any of these hits occur in the spacers of this species by using crispr finder and the nucleotide base numbers

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'''Halobacterium salinarium R1:''' Accession number determined from NCBI: NC_010364

Lots of hits, the ones shown have e-values less than 0.003, next e-value hit not shown is 0.011

[[Image:HS1.jpg]]

[[Image:HS2.jpg]]

[[Image:HS3.jpg]]

[[Image:HS4.jpg]]

Check to see if any of these hits occur in the spacers of this species by using crispr finder and the nucleotide base numbers

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Haloarula californiae= CANNOT FIND ACCESSION NUMBER!!!!!!!!!


Haloferax volcanii= CANNOT FIND ACCESSION NUMBER for whole genome!!!!!!!


Haloferax mediterranei


Haloarcula sinaiiensis


Haloarcula vallismortis


Haloarcula marismortui