Difference between revisions of "MWSU protocols"

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[[What to do with a new clone]]
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'''Purification of DNA'''
 +
 
 +
[[Isolation of Genomic DNA from Bacteria]]
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 +
[[Gel Purification New England BioLabs Monarch]]
 +
 
 +
'''PCR'''
 +
 
 +
[[iPCR]]
 +
 
 +
[[Gradient/Standard PCR]]
 +
 
 +
[[Resuspending Oligos]]
 +
 
 +
[[Davidson_Missouri_W/colony_PCR | Colony PCR]]
 +
 
 +
[[Template Preparation for RT-qPCR]]
 +
 
 +
[[New Chaperone PCR]]
 +
 
 +
[[LongAmp PCR]]
 +
 
 +
'''Recombinant DNA Production'''
  
[[Diagnostic RP Digestion for Checking Insert Size]]
+
[[Zymo Research Plasmid Minipreps]]
  
[[DNA Sequencing at Iowa State University]]
+
[[Zymo Research Clean and Concentrate for Plasmid DNA]]
  
[[BioBrick Digestions for Fragment and Vector Preparation]]
+
[[Golden Gate Assembly Protocol]]
  
[[Reducing Background from Double Digested Vector]]
+
[[Golden Gate Assembly Single Molecule Protocol]]
  
 
[[Pouring an Agarose Gel]]
 
[[Pouring an Agarose Gel]]
 +
 +
[[BioBrick Digestions for Fragment and Vector Preparation]]
  
 
[[Fragment Purification]]
 
[[Fragment Purification]]
 +
 +
[[Gibson Assembly]]
 +
 +
[[Direct Synthesis with Overlapping Oligos]]
 +
 +
[[Annealing Oligos for Cloning]]
  
 
[[Ethanol Precipitation of Vector DNA]]
 
[[Ethanol Precipitation of Vector DNA]]
 +
 +
[[Reducing Background from Double Digested Vector]]
 +
 +
[[File: PClone_Procedure_for_GCAT_SB_Workshop_2014_new_version.pptx]]
 +
 +
'''Ligation and Transformation'''
  
 
[[BioBrick Ligations]]
 
[[BioBrick Ligations]]
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[[Ligation and Transformation]]
 
[[Ligation and Transformation]]
  
[[Davidson_Missouri_W/colony_PCR | Colony PCR]]
+
[[Electroporation Transformation]]
 +
 
 +
[[SOC Protocol for Transformations]]
 +
 
 +
'''Screening Clones'''
 +
 
 +
[[Diagnostic RP Digestion for Checking Insert Size]]
 +
 
 +
[[DNA Sequencing at Iowa State University]]
 +
 
 +
[[DNA Sequencing at Eurofins]]
 +
 
 +
[[What to do with a new clone]]
 +
 
 +
[[How to make a new Registry page]]
 +
 
 +
'''Measuring Phenotypes'''
 +
 
 +
[[Measuring Fluorescence in Bacteria]]
 +
 
 +
[[Camera Settings for Taking Pictures of Plates]]
  
[[Standard PCR]]
+
'''DNA and E coli'''
  
[[Isolation of Genomic DNA from Bacteria]]
+
[[GCAT Library of Quality Parts]]
  
[[Resuspending Oligos]]
+
[[MWSU Freezer Parts]]
  
[[Direct Synthesis with Overlapping Oligos]]
+
'''Working With Bacteria'''
  
 
[[Bacterial Media]]
 
[[Bacterial Media]]
  
[[Measuring Fluorescence in Bacteria]]
+
[[Washing Beads]]
 +
 
 +
[[Cleaning Plate Replication Pads]]

Latest revision as of 20:08, 14 June 2018

Purification of DNA

Isolation of Genomic DNA from Bacteria

Gel Purification New England BioLabs Monarch

PCR

iPCR

Gradient/Standard PCR

Resuspending Oligos

Colony PCR

Template Preparation for RT-qPCR

New Chaperone PCR

LongAmp PCR

Recombinant DNA Production

Zymo Research Plasmid Minipreps

Zymo Research Clean and Concentrate for Plasmid DNA

Golden Gate Assembly Protocol

Golden Gate Assembly Single Molecule Protocol

Pouring an Agarose Gel

BioBrick Digestions for Fragment and Vector Preparation

Fragment Purification

Gibson Assembly

Direct Synthesis with Overlapping Oligos

Annealing Oligos for Cloning

Ethanol Precipitation of Vector DNA

Reducing Background from Double Digested Vector

File:PClone Procedure for GCAT SB Workshop 2014 new version.pptx

Ligation and Transformation

BioBrick Ligations

Ligation and Transformation

Electroporation Transformation

SOC Protocol for Transformations

Screening Clones

Diagnostic RP Digestion for Checking Insert Size

DNA Sequencing at Iowa State University

DNA Sequencing at Eurofins

What to do with a new clone

How to make a new Registry page

Measuring Phenotypes

Measuring Fluorescence in Bacteria

Camera Settings for Taking Pictures of Plates

DNA and E coli

GCAT Library of Quality Parts

MWSU Freezer Parts

Working With Bacteria

Bacterial Media

Washing Beads

Cleaning Plate Replication Pads