User contributions
From GcatWiki
- 18:55, 5 April 2016 (diff | hist) . . (+49) . . March 31, 2016 (current)
- 18:55, 31 March 2016 (diff | hist) . . (+408) . . N March 31, 2016 (Created page with "DNA replication is down regulated- story: energy needs to go elsewhere decide to focus our attention on signaling pathway since replication genes were both up and down regul...")
- 17:39, 31 March 2016 (diff | hist) . . (+23) . . Ashlyn (current)
- 18:24, 24 March 2016 (diff | hist) . . (+473) . . March 24, 2016 (current)
- 18:53, 22 March 2016 (diff | hist) . . (+1,229) . . March 22, 2016 (current)
- 17:36, 22 March 2016 (diff | hist) . . (+80) . . N March 24, 2016 (Created page with " [http://gcat.davidson.edu/mediawiki-1.19.1/index.php/Ashlyn Ashlyn's Main Page]")
- 17:36, 22 March 2016 (diff | hist) . . (+80) . . N March 22, 2016 (Created page with " [http://gcat.davidson.edu/mediawiki-1.19.1/index.php/Ashlyn Ashlyn's Main Page]")
- 17:36, 22 March 2016 (diff | hist) . . (+45) . . Ashlyn
- 18:55, 17 March 2016 (diff | hist) . . (+311) . . March 17, 2016 (current)
- 17:45, 17 March 2016 (diff | hist) . . (+309) . . N March 17, 2016 (Created page with "*Collaborate with organ groups for final project! Maybe initiate google doc? *Find candidate genes *Try to use KEGG because it seems like a really cool and useful tool *...")
- 17:40, 17 March 2016 (diff | hist) . . (+24) . . Ashlyn
- 18:59, 15 March 2016 (diff | hist) . . (+206) . . N March 15, 2016 (Created page with "Presentation #1 Day! Contig: assembled piece of DNA that can have multiple genes on it. Gene and contig are not synonymous. [http://gcat.davidson.edu/mediawiki-1.19.1/index...") (current)
- 17:33, 15 March 2016 (diff | hist) . . (+23) . . Ashlyn
- 19:45, 10 March 2016 (diff | hist) . . (+943) . . March 10, 2016 (current)
- 18:44, 10 March 2016 (diff | hist) . . (+24) . . March 10, 2016
- 14:56, 10 March 2016 (diff | hist) . . (+458) . . February 25, 2016 (current)
- 15:35, 9 March 2016 (diff | hist) . . (-15) . . February 23, 2016 (→Classwork) (current)
- 15:34, 9 March 2016 (diff | hist) . . (+17) . . February 23, 2016 (→Classwork)
- 15:34, 9 March 2016 (diff | hist) . . (+4) . . February 23, 2016 (→Classwork)
- 15:32, 9 March 2016 (diff | hist) . . (-7) . . February 23, 2016 (→Classwork)
- 15:31, 9 March 2016 (diff | hist) . . (+2) . . February 23, 2016
- 15:31, 9 March 2016 (diff | hist) . . (-3) . . February 23, 2016 (→Supervised Clustering Attempts:)
- 15:31, 9 March 2016 (diff | hist) . . (+183) . . February 23, 2016
- 15:11, 9 March 2016 (diff | hist) . . (+71) . . February 18, 2016 (current)
- 15:07, 9 March 2016 (diff | hist) . . (+148) . . February 18, 2016
- 15:00, 9 March 2016 (diff | hist) . . (+221) . . February 18, 2016
- 14:44, 9 March 2016 (diff | hist) . . (+3) . . February 11, 2016 (current)
- 14:44, 9 March 2016 (diff | hist) . . (+83) . . February 11, 2016
- 14:43, 9 March 2016 (diff | hist) . . (-84) . . February 16, 2016 (current)
- 14:43, 9 March 2016 (diff | hist) . . (-10) . . February 16, 2016
- 14:42, 9 March 2016 (diff | hist) . . (+174) . . February 16, 2016
- 14:37, 9 March 2016 (diff | hist) . . (+1) . . February 16, 2016 (→Identified Genes)
- 14:37, 9 March 2016 (diff | hist) . . (-5) . . February 16, 2016
- 14:36, 9 March 2016 (diff | hist) . . (-92) . . February 16, 2016
- 14:09, 9 March 2016 (diff | hist) . . (+25) . . February 11, 2016
- 14:08, 9 March 2016 (diff | hist) . . (-104) . . February 16, 2016
- 04:51, 9 March 2016 (diff | hist) . . (-5) . . February 11, 2016
- 04:50, 9 March 2016 (diff | hist) . . (+1) . . February 11, 2016
- 04:50, 9 March 2016 (diff | hist) . . (+4) . . February 11, 2016
- 04:49, 9 March 2016 (diff | hist) . . (+282) . . February 11, 2016
- 04:43, 9 March 2016 (diff | hist) . . (+36) . . February 11, 2016
- 04:42, 9 March 2016 (diff | hist) . . (+5) . . February 9, 2016 (current)
- 04:41, 9 March 2016 (diff | hist) . . (+18) . . February 9, 2016 (→Intensity Plots)
- 04:40, 9 March 2016 (diff | hist) . . (-357) . . February 9, 2016
- 19:54, 8 March 2016 (diff | hist) . . (+544) . . March 8, 2016 (current)
- 19:12, 8 March 2016 (diff | hist) . . (+63) . . March 8, 2016
- 19:11, 8 March 2016 (diff | hist) . . (+38) . . March 8, 2016
- 19:09, 8 March 2016 (diff | hist) . . (+57) . . N File:March 8 Normalized correlation clustering.png (Correlation clustering after accounting for normalization) (current)
- 19:04, 8 March 2016 (diff | hist) . . (+129) . . March 8, 2016
- 15:54, 8 March 2016 (diff | hist) . . (+58) . . March 8, 2016
- 15:42, 8 March 2016 (diff | hist) . . (+15) . . February 9, 2016
- 15:31, 8 March 2016 (diff | hist) . . (+199) . . February 9, 2016
- 15:21, 8 March 2016 (diff | hist) . . (+1) . . February 2, 2016 (→R-Commander Work) (current)
- 15:20, 8 March 2016 (diff | hist) . . (-1) . . February 2, 2016
- 15:17, 8 March 2016 (diff | hist) . . (+85) . . N March 10, 2016 (Created page with " [http://gcat.davidson.edu/mediawiki-1.19.1/index.php/Ashlyn Ashlyn's Main Page]")
- 15:17, 8 March 2016 (diff | hist) . . (+89) . . N March 8, 2016 (Created page with " [http://gcat.davidson.edu/mediawiki-1.19.1/index.php/Ashlyn Ashlyn's Main Page]")
- 15:17, 8 March 2016 (diff | hist) . . (+43) . . Ashlyn
- 19:54, 25 February 2016 (diff | hist) . . (+900) . . N February 25, 2016 (Created page with "fix bad characters new protein functions intestines --> filter high values, corr FPKM; right now we are getting a mixture of fed and non-fed when clustering. DEseq has al...")
- 18:37, 25 February 2016 (diff | hist) . . (+25) . . Ashlyn
- 19:51, 23 February 2016 (diff | hist) . . (+969) . . February 23, 2016
- 18:50, 23 February 2016 (diff | hist) . . (+1,045) . . N February 23, 2016 (Created page with "I think we are doing R-studio Check katherine's 2/16 notes. Get everything up to date by Spring Break. "expected_count" in coding NOT "FPKM" or else we are re-normalizing pre...")
- 18:36, 23 February 2016 (diff | hist) . . (+28) . . Ashlyn
- 19:11, 18 February 2016 (diff | hist) . . (+106) . . February 18, 2016
- 19:05, 18 February 2016 (diff | hist) . . (+1,553) . . N February 18, 2016 (Created page with "Dr. C and Dr. Heyer made cool progress. We did not do Euclidian distance, we looked at CORRElATION, we can also do absolute value. p value = 0.01 instead of 0.05 so that we ...")
- 18:35, 18 February 2016 (diff | hist) . . (+25) . . Ashlyn
- 19:54, 16 February 2016 (diff | hist) . . (+90) . . February 16, 2016
- 19:49, 16 February 2016 (diff | hist) . . (+86) . . February 16, 2016
- 19:49, 16 February 2016 (diff | hist) . . (+1,917) . . N February 16, 2016 (Created page with "== Classwork == *Still trying to do searches by gene ontology terms *Still trying to figure out if our organ samples are good samples (using DEseq?) **DEseq = different...")
- 18:34, 16 February 2016 (diff | hist) . . (+23) . . Ashlyn
- 18:03, 13 February 2016 (diff | hist) . . (+30) . . February 9, 2016 (→Classwork)
- 18:02, 13 February 2016 (diff | hist) . . (+421) . . February 9, 2016
- 17:42, 13 February 2016 (diff | hist) . . (+489) . . February 4, 2016 (→Correlation Activity) (current)
- 17:38, 13 February 2016 (diff | hist) . . (+4,107) . . February 9, 2016
- 17:37, 13 February 2016 (diff | hist) . . (+2) . . February 4, 2016
- 17:36, 13 February 2016 (diff | hist) . . (+704) . . February 4, 2016
- 17:28, 13 February 2016 (diff | hist) . . (+355) . . February 4, 2016
- 17:22, 13 February 2016 (diff | hist) . . (+3) . . February 2, 2016
- 17:22, 13 February 2016 (diff | hist) . . (+728) . . February 2, 2016 (→Classwork)
- 17:15, 13 February 2016 (diff | hist) . . (+342) . . February 2, 2016 (→Classwork)
- 17:15, 13 February 2016 (diff | hist) . . (+338) . . January 28, 2016 (→Classwork) (current)
- 17:14, 13 February 2016 (diff | hist) . . (+1) . . February 2, 2016 (→Classwork)
- 17:13, 13 February 2016 (diff | hist) . . (-4) . . February 2, 2016 (→Classwork)
- 17:12, 13 February 2016 (diff | hist) . . (+11) . . February 2, 2016 (→Classwork)
- 17:11, 13 February 2016 (diff | hist) . . (+1,166) . . February 2, 2016
- 17:01, 13 February 2016 (diff | hist) . . (+18) . . February 2, 2016
- 17:00, 13 February 2016 (diff | hist) . . (+4) . . January 21, 2016 (→Analyze FastQC data analysis results downloaded from class on January 19, 2016) (current)
- 17:00, 13 February 2016 (diff | hist) . . (-3) . . January 14, 2016 (→Questions to Consider:) (current)
- 16:59, 13 February 2016 (diff | hist) . . (0) . . January 28, 2016
- 16:58, 13 February 2016 (diff | hist) . . (+856) . . January 28, 2016
- 16:49, 13 February 2016 (diff | hist) . . (+122) . . Ashlyn
- 16:47, 13 February 2016 (diff | hist) . . (0) . . January 26, 2016 (→Questions to Consider:) (current)
- 15:08, 13 February 2016 (diff | hist) . . (+1,352) . . January 26, 2016
- 14:54, 13 February 2016 (diff | hist) . . (-3) . . January 21, 2016 (→Questions to Consider)
- 14:54, 13 February 2016 (diff | hist) . . (-3) . . January 19, 2016 (→Questions to Consider) (current)
- 14:53, 13 February 2016 (diff | hist) . . (+3) . . January 21, 2016 (→"The Burmese Pythod Genome Reveals the Molecular Basis for Extreme Adaptation in Snakes")
- 14:53, 13 February 2016 (diff | hist) . . (+13) . . January 19, 2016
- 14:52, 13 February 2016 (diff | hist) . . (0) . . January 21, 2016
- 14:51, 13 February 2016 (diff | hist) . . (-37) . . January 21, 2016
- 14:48, 13 February 2016 (diff | hist) . . (+1,355) . . January 21, 2016
- 14:26, 13 February 2016 (diff | hist) . . (+4) . . January 19, 2016
- 19:29, 12 February 2016 (diff | hist) . . (+87) . . February 11, 2016
- 19:29, 12 February 2016 (diff | hist) . . (+87) . . N February 9, 2016 (Created page with " [http://gcat.davidson.edu/mediawiki-1.19.1/index.php/Ashlyn Ashlyn's Main Page]")
- 19:29, 12 February 2016 (diff | hist) . . (+87) . . February 4, 2016
- 19:29, 12 February 2016 (diff | hist) . . (+88) . . N February 2, 2016 (Created page with " [http://gcat.davidson.edu/mediawiki-1.19.1/index.php/Ashlyn Ashlyn's Main Page]")
- 19:29, 12 February 2016 (diff | hist) . . (+89) . . N January 28, 2016 (Created page with " [http://gcat.davidson.edu/mediawiki-1.19.1/index.php/Ashlyn Ashlyn's Main Page]")
- 19:28, 12 February 2016 (diff | hist) . . (-1) . . January 26, 2016 (→Article Discussion:)
- 19:28, 12 February 2016 (diff | hist) . . (-1) . . January 21, 2016 (→Classwork:)
- 19:28, 12 February 2016 (diff | hist) . . (-5) . . January 21, 2016 (→Article Discussions:)
- 19:28, 12 February 2016 (diff | hist) . . (-1) . . January 19, 2016 (→Classwork:)
- 19:27, 12 February 2016 (diff | hist) . . (-3) . . January 19, 2016 (→Article Discussions)
- 19:27, 12 February 2016 (diff | hist) . . (+3) . . January 2, 2016 (current)
- 19:27, 12 February 2016 (diff | hist) . . (-2) . . January 2, 2016 (→Dr. Campbell and Team's Experimental Protocol:)
- 19:26, 12 February 2016 (diff | hist) . . (-1) . . January 14, 2016 (→Article Discussions)
- 19:26, 12 February 2016 (diff | hist) . . (-2) . . January 26, 2016 (→Article Discussion:)
- 19:26, 12 February 2016 (diff | hist) . . (+112) . . N January 26, 2016 (Created page with "=== Article Discussion: === [http://gcat.davidson.edu/mediawiki-1.19.1/index.php/Ashlyn Ashlyn's Main Page]")
- 19:25, 12 February 2016 (diff | hist) . . (+80) . . January 21, 2016
- 19:25, 12 February 2016 (diff | hist) . . (+2) . . January 19, 2016
- 19:24, 12 February 2016 (diff | hist) . . (-8) . . January 19, 2016 (→Other Classwork:)
- 19:24, 12 February 2016 (diff | hist) . . (+522) . . N January 21, 2016 (Created page with "== Article Discussions: == === "The Burmese Pythod Genome Reveals the Molecular Basis for Extreme Adaptation in Snakes" === == Classwork: == <big>''References''</bi...")
- 19:19, 12 February 2016 (diff | hist) . . (+60) . . January 19, 2016 (→Other Classwork:)
- 19:18, 12 February 2016 (diff | hist) . . (0) . . January 19, 2016 (→Questions to Consider:)
- 19:17, 12 February 2016 (diff | hist) . . (+1,482) . . N January 19, 2016 (Created page with "== Article Discussions == === "Responses of Python Gastrointestinal Regulatory Peptides to Feeding" === *Hormone and peptide levels are elevated after feeding. *Organ m...")
- 18:57, 12 February 2016 (diff | hist) . . (-4) . . January 14, 2016 (→Questions to Consider:)
- 18:56, 12 February 2016 (diff | hist) . . (-1) . . January 14, 2016 (→Questions to Consider:)
- 18:55, 12 February 2016 (diff | hist) . . (+90) . . January 14, 2016 (→Questions to Consider:)
- 18:52, 12 February 2016 (diff | hist) . . (+1,350) . . January 14, 2016
- 18:32, 12 February 2016 (diff | hist) . . (+297) . . N January 14, 2016 (Created page with "''References'' *Secor, Stephen M., and Diamond, Jared. “Adaptive Responses to Feeding in Burmese Pythons: Pay Before Pumping.” The Journal of Experimental Biology. 198 ...")
- 18:29, 12 February 2016 (diff | hist) . . (-23) . . Ashlyn
- 18:29, 12 February 2016 (diff | hist) . . (+203) . . Ashlyn
- 18:23, 12 February 2016 (diff | hist) . . (+151) . . N February 4, 2016 (Created page with " What do we want out of our research and how do we get there? What do we need to do with each of our twelve data sets? -more notes in lab notebook")
- 18:22, 12 February 2016 (diff | hist) . . (+113) . . Ashlyn
- 18:20, 12 February 2016 (diff | hist) . . (-1) . . Ashlyn
- 18:19, 12 February 2016 (diff | hist) . . (-2,285) . . Ashlyn
- 18:16, 12 February 2016 (diff | hist) . . (+86) . . January 2, 2016
- 18:13, 12 February 2016 (diff | hist) . . (+1) . . January 2, 2016 (→Snake Small Intestine Gene Search)
- 18:12, 12 February 2016 (diff | hist) . . (0) . . January 2, 2016 (→Snake Small Intestine Gene Search)
- 18:11, 12 February 2016 (diff | hist) . . (+558) . . January 2, 2016 (→Snake Small Intestine Gene Search)
- 18:03, 12 February 2016 (diff | hist) . . (+149) . . January 2, 2016
- 17:56, 12 February 2016 (diff | hist) . . (+230) . . January 2, 2016
- 16:37, 12 February 2016 (diff | hist) . . (+1,096) . . January 2, 2016
- 16:20, 12 February 2016 (diff | hist) . . (+2,147) . . N January 2, 2016 (Created page with "== Dr. Campbell and team's Experimental Protocol: == -Flash freeze organs after harvest because RNA is unstable and we do not want it to degrade. -100 micro grams of RNA fro...")
- 16:11, 12 February 2016 (diff | hist) . . (+21) . . Ashlyn
- 19:08, 11 February 2016 (diff | hist) . . (+435) . . N February 11, 2016 (Created page with "Cluster Self-Quiz Sampler take away: You can cluster anything if you change threshold. We have redundancy without competition because we have three groups working on the same...")
- 18:38, 11 February 2016 (diff | hist) . . (+10) . . Ashlyn
- 18:37, 11 February 2016 (diff | hist) . . (+14) . . Ashlyn
- 19:36, 9 February 2016 (diff | hist) . . (+4,096) . . Ashlyn
- 19:21, 4 February 2016 (diff | hist) . . (+100) . . Ashlyn
- 19:11, 4 February 2016 (diff | hist) . . (+12) . . Ashlyn
- 18:47, 4 February 2016 (diff | hist) . . (+203) . . Ashlyn
- 18:45, 4 February 2016 (diff | hist) . . (+35) . . Ashlyn
- 18:52, 2 February 2016 (diff | hist) . . (+286) . . Ashlyn
- 19:54, 14 January 2016 (diff | hist) . . (-1) . . Ashlyn
- 19:53, 14 January 2016 (diff | hist) . . (+352) . . Ashlyn
- 19:41, 14 January 2016 (diff | hist) . . (+437) . . Ashlyn
- 19:19, 14 January 2016 (diff | hist) . . (-675) . . Ashlyn
- 15:44, 14 January 2016 (diff | hist) . . (+87) . . Ashlyn
- 15:43, 14 January 2016 (diff | hist) . . (+3) . . Ashlyn
- 15:43, 14 January 2016 (diff | hist) . . (+273) . . Ashlyn
- 15:40, 14 January 2016 (diff | hist) . . (-45) . . Ashlyn
- 15:40, 14 January 2016 (diff | hist) . . (+47) . . Ashlyn
- 15:39, 14 January 2016 (diff | hist) . . (+5) . . Ashlyn
- 15:38, 14 January 2016 (diff | hist) . . (+172) . . Ashlyn
- 15:37, 14 January 2016 (diff | hist) . . (+177) . . Ashlyn
- 19:54, 12 January 2016 (diff | hist) . . (+1,099) . . Ashlyn
- 19:20, 12 January 2016 (diff | hist) . . (+42) . . N Ashlyn (Created page with "Welcome to Ashlyn's page. Enjoy your stay.")