Difference between revisions of "Summer 2012 SynBio Project (Davidson and MWSU)"

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== Student Proposals from Ind. Studies==
 
== Student Proposals from Ind. Studies==
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* Erich Baker Proposal: [[Media:Erich_Baker_proposal.docx]]
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* Erich Baker Proposal: [[Media:Erich_Baker_proposal.docx]] This proposal deals with Phytochromes and Light Sensitive Channel Proteins
 
* Ben Clarkson Proposal: [[Media:Ben_Clarkson_proposal.docx]]
 
* Ben Clarkson Proposal: [[Media:Ben_Clarkson_proposal.docx]]
 
* Duke DeLoache Proposal: [[Media:Duke_DeLoache_Proposal.docx]]
 
* Duke DeLoache Proposal: [[Media:Duke_DeLoache_Proposal.docx]]

Revision as of 17:48, 23 May 2012

Summer 2012 Synthetic Biology Project: MWSU and Davidson College


  1. Davidson Protocols
  2. MWSU_protocols
  3. GCAT-alog Freezer Stocks
  4. Laboratory_Notebooks
  5. Golden Gate


Student Proposals from Ind. Studies


PPT Presentations

  • This PPT file contains all the slides from student presentations addressing the idea proposed by MWSU.

Media:Reports_on_Circuits.pptx

  • This PPT contains slides summarizing some of the best and most complicated papers from Week 11.

Media:Week_11.pptx

Papers

Methods Papers

  • DNA assembly for synthetic biology: from parts to pathways and beyond

Tom Ellis, Tom Adieac and Geoff S. Baldwin
Integr. Biol., 2011, 3, 109–118

  • Everyone should watch this 5 minute video on optogenetics. Combine that video with the 2010 champoinship iGEM invention of E. glowi.


Older Lab Papers

  • Engineering bacteria to solve the Burnt Pancake Problem.

Haynes, Karmella, et al.
Journal of Biological Engineering. Vol. 2(8): 1 – 12.

  • Solving a Hamiltonian Path Problem with a Bacterial Computer.

Baumgardner, Jordan et al.
Journal of Biological Engineering. Vol. 3:11

  • Bacterial Hash Function Using DNA-Based XOR Logic Reveals Unexpected Behavior of the LuxR Promoter.

Brianna Pearson*, Kin H. Lau* et al.
Interdisciplinary Bio Central. Vol. 3, article no. 10.
Time Delayed Growth Movie


Network Papers

Jonathan M. Raser and Erin K. O’Shea
Science. Vol. 309, page 2010

Nagarajan Nandagopal and Michael B. Elowitz
Science. Vol. 333, page 1244.

R. Milo, S. Shen-Orr, et al
Science. Vol. 298, page 824.

Yang-Yu Liu, Jean-Jacques Slotine, & Albert-La ́szlo ́ Baraba ́si
Nature. 2011. Vol. 473, page 167.


Ethics Papers

Colin Mcilswain
Nature. Vol 465, page 867.

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